RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 ZNF713Q8N859 430 aaPredicted RBP9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 CCDC12Q8WUD4 166 aaPredicted RBP9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 FERMT2Q96AC1 680 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 PAGE5Q96GU1 130 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 MTMR9Q96QG7 549 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 VCPKMTQ9H867 229 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 PSTPIP2Q9H939 334 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 FBXO28Q9NVF7 368 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 FAM13BQ9NYF5 915 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 USP25Q9UHP3 1055 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 ZNF112Q9UJU3 913 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 SYNPO2Q9UMS6 1093 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 MYH6P13533 1939 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 ADCY5O95622 1261 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 BMP15O95972 392 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 ZNF165P49910 485 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 CCDC173Q0VFZ6 552 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 LETM2Q2VYF4 491 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 ARL6IP4Q66PJ3 421 aaKnown RBP9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 NEK8Q86SG6 692 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 FBXO11Q86XK2 927 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 GPC2Q8N158 579 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 REXO1Q8N1G1 1221 aaKnown RBP9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 CRYGNQ8WXF5 182 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 STAMQ92783 540 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 DHX58Q96C10 678 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 MED15Q96RN5 788 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 MMTAG2Q9BU76 263 aaKnown RBP9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
HMGN1P34-201ENST00000413023 SLC37A4O43826 429 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 CCNT1O60563 726 aaKnown RBP9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 USP2O75604 605 aaPredicted RBP9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 MRPL12P52815 198 aaKnown RBP9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 NCAPHQ15003 741 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 STX1AQ16623 288 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 NAALADL2Q58DX5 795 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 PPP1R18Q6NYC8 613 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 CNNM3Q8NE01 707 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 SPATA20Q8TB22 786 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 HAS1Q92839 578 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 ZKSCAN4Q969J2 545 aaPredicted RBP9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 GJA10Q969M2 543 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 UIMC1Q96RL1 719 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 AMNQ9BXJ7 453 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 ARHGEF10LQ9HCE6 1279 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 MAN1B1Q9UKM7 699 aa9.81□□□□□ -0.84
HMGN1P34-201ENST00000413023 CTNND1O60716 968 aaKnown RBP9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 PLA2G6O60733 806 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 ASNSP08243 561 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 SLFN14P0C7P3 912 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 LONP1P36776 959 aaKnown RBP9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 PRPHP41219 470 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 AFMP43652 599 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 DPYDQ12882 1025 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 TNFAIP1Q13829 316 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 MORC3Q14149 939 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 KARSQ15046 597 aaKnown RBP9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 POSTNQ15063 836 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 USH1GQ495M9 461 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 NT5DC1Q5TFE4 455 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 DTHD1Q6ZMT9 781 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 CUL5Q93034 780 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 PLIN2Q99541 437 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 ZNF341Q9BYN7 854 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 HSD3B7Q9H2F3 369 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 RANBP17Q9H2T7 1088 aaKnown RBP9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 ANO10Q9NW15 660 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 RNF181Q9P0P0 153 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 ZNF536O15090 1300 aa9.8□□□□□ -0.84
HMGN1P34-201ENST00000413023 ARFGEF1Q9Y6D6 1849 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 OR52Z1P0C646 297 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 KCNA4P22459 653 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 HOXA13P31271 388 aaPredicted RBP9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 TECP42680 631 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 TXKP42681 527 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 SPP2Q13103 211 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 CCDC174Q6PII3 467 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 MBOAT7Q96N66 472 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 PNMA5Q96PV4 448 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 ANO3Q9BYT9 981 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 CCSER1Q9C0I3 900 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 KIAA1683Q9H0B3 1180 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 GGA3Q9NZ52 723 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 MYH4Q9Y623 1939 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 SSC5DA1L4H1 1573 aa9.79□□□□□ -0.84
HMGN1P34-201ENST00000413023 MYH8P13535 1937 aa9.78□□□□□ -0.84
HMGN1P34-201ENST00000413023 CYP3A7-CYP3A51PA0A087WV96 503 aa9.78□□□□□ -0.84
HMGN1P34-201ENST00000413023 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
HMGN1P34-201ENST00000413023 PTPRAP18433 802 aa9.78□□□□□ -0.84
HMGN1P34-201ENST00000413023 CYP3A7P24462 503 aa9.78□□□□□ -0.84
HMGN1P34-201ENST00000413023 IKQ13123 557 aaPredicted RBP9.78□□□□□ -0.84
HMGN1P34-201ENST00000413023 GRB10Q13322 594 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms