RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 GHRHRQ02643 423 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 NR5A1Q13285 461 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 TRIM29Q14134 588 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 NOM1Q5C9Z4 860 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 EARS2Q5JPH6 523 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 FOXD4L5Q5VV16 416 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 FERMT3Q86UX7 667 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 DIS3L2Q8IYB7 885 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 FOXD4L4Q8WXT5 416 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 PCDHA4Q9UN74 947 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 RIPK3Q9Y572 518 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
SMARCAL1-204ENST00000412913 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 SMCO2A6NFE2 343 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 ZBED4O75132 1171 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 OSBPP22059 807 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 KRT2P35908 639 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 NLRP5P59047 1200 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 HTRA3P83110 453 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 CPXCR1Q8N123 301 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 RASGRP4Q8TDF6 673 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 RIC8AQ9NPQ8 531 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 RBPJLQ9UBG7 517 aa12.14□□□□□ -0.47
SMARCAL1-204ENST00000412913 NFIBO00712 420 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 MEIS2O14770 477 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 AOC2O75106 756 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 CALML3P27482 149 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 ADCY7P51828 1080 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 UBE2SQ16763 222 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 DEFB115Q30KQ5 88 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 SNRNP48Q6IEG0 339 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 GALNT17Q6IS24 598 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 IFNL1Q8IU54 200 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 TEX13BQ9BXU2 312 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 MORF4L1Q9UBU8 362 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-204ENST00000412913 ALAS1P13196 640 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 TM4SF4P48230 202 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 ERVK-24P63145 666 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 SREBF2Q12772 1141 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 NOGQ13253 232 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 RIOX2Q8IUF8 465 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 CUL5Q93034 780 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 PARK7Q99497 189 aaKnown RBP12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 ZSCAN16Q9H4T2 348 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 RNF146Q9NTX7 359 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 TMEM260Q9NX78 707 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 MRPL11Q9Y3B7 192 aaKnown RBP12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 RABGAP1Q9Y3P9 1069 aa12.12□□□□□ -0.47
SMARCAL1-204ENST00000412913 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 WNT7AO00755 349 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 EDIL3O43854 480 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 BCRP11274 1271 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 GNA11P29992 359 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 STAT3P40763 770 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 HSD17B4P51659 736 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 INHBEP58166 350 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 TRAF1Q13077 416 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 GRM1Q13255 1194 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 Q3C1V9 767 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 TKFCQ3LXA3 575 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 USP17L6PQ6QN14 398 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 PGBD1Q96JS3 809 aa12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-204ENST00000412913 BRMS1Q9HCU9 246 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms