RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
SMPD4-203ENST00000412570 AMNQ9BXJ7 453 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 TMOD4Q9NZQ9 345 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 TMX2Q9Y320 296 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 MEIS1O00470 390 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 RILPL1Q5EBL4 403 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 SASS6Q6UVJ0 657 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 LDHDQ86WU2 507 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 KRI1Q8N9T8 703 aaKnown RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 RGPD3A6NKT7 1758 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 RGPD4Q7Z3J3 1758 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 PTGS1P23219 599 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 U2AF2P26368 475 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 GNA11P29992 359 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 SLC39A14Q15043 492 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 CCDC183Q5T5S1 534 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 SCYL3Q8IZE3 742 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 SPC24Q8NBT2 197 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 CUL5Q93034 780 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 KLRG1Q96E93 195 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 RCOR1Q9UKL0 485 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 STX17P56962 302 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 ANO6Q4KMQ2 910 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 SNRNP48Q6IEG0 339 aaKnown RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 KCNG4Q8TDN1 519 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 FOXP1Q9H334 677 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 KCNH3Q9ULD8 1083 aa11.05□□□□□ -0.64
SMPD4-203ENST00000412570 MKI67P46013 3256 aaKnown RBP11.05□□□□□ -0.64
SMPD4-203ENST00000412570 XRCC6P12956 609 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMPD4-203ENST00000412570 L1TD1Q5T7N2 865 aaKnown RBP11.04□□□□□ -0.64
SMPD4-203ENST00000412570 PPP1R13LQ8WUF5 828 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 SLC10A4Q96EP9 437 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 GRPEL1Q9HAV7 217 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 ABCB11O95342 1321 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 KIAA1551Q9HCM1 1747 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 CTNND1O60716 968 aaKnown RBP11.04□□□□□ -0.64
SMPD4-203ENST00000412570 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-203ENST00000412570 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 OPTNQ96CV9 577 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 VPS33BQ9H267 617 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 RIOX1Q9H6W3 641 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 SAMM50Q9Y512 469 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 POTECB2RU33 542 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 MRPL12P52815 198 aaKnown RBP11.04□□□□□ -0.64
SMPD4-203ENST00000412570 GPIHBP1Q8IV16 184 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
SMPD4-203ENST00000412570 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 NASPP49321 788 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 PTPAQ15257 358 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 DYMQ7RTS9 669 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 SMCR8Q8TEV9 937 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 SLF1Q9BQI6 1058 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 A0A087X0B3 334 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 NEMFO60524 1076 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 PGK2P07205 417 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 UBA7P41226 1012 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 BACE1P56817 501 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 NCAPH2Q6IBW4 605 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 NEK8Q86SG6 692 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 JMYQ8N9B5 988 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 ABT1Q9ULW3 272 aaKnown RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 IREB2P48200 963 aaKnown RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 IL17AQ16552 155 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 DTHD1Q6ZMT9 781 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
SMPD4-203ENST00000412570 CHURC1Q8WUH1 139 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 ANKS1AQ92625 1134 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 FAM13BQ9NYF5 915 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 CDK5RAP2Q96SN8 1893 aa11.03□□□□□ -0.64
SMPD4-203ENST00000412570 ATRNL1Q5VV63 1379 aa11.02□□□□□ -0.64
SMPD4-203ENST00000412570 IDEP14735 1019 aa11.02□□□□□ -0.64
SMPD4-203ENST00000412570 PPP2R5BQ15173 497 aa11.02□□□□□ -0.64
SMPD4-203ENST00000412570 AXDND1Q5T1B0 1012 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-203ENST00000412570 ANO3Q9BYT9 981 aa11.02□□□□□ -0.64
SMPD4-203ENST00000412570 FAM170AA1A519 330 aa11.02□□□□□ -0.65
SMPD4-203ENST00000412570 CALCRLQ16602 461 aa11.02□□□□□ -0.65
SMPD4-203ENST00000412570 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.65
SMPD4-203ENST00000412570 SH2D4AQ9H788 454 aa11.02□□□□□ -0.65
SMPD4-203ENST00000412570 PGAP2Q9UHJ9 254 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms