RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.92■■□□□ 1.74
CROT-202ENST00000412227 TIMP1P01033 207 aa25.92■■□□□ 1.74
CROT-202ENST00000412227 HSPD1P10809 573 aaKnown RBP25.92■■□□□ 1.74
CROT-202ENST00000412227 CDK7P50613 346 aa25.92■■□□□ 1.74
CROT-202ENST00000412227 NMIQ13287 307 aaPredicted RBP25.92■■□□□ 1.74
CROT-202ENST00000412227 NSMFQ6X4W1 530 aa25.92■■□□□ 1.74
CROT-202ENST00000412227 RILPL2Q969X0 211 aa25.92■■□□□ 1.74
CROT-202ENST00000412227 CYP39A1Q9NYL5 469 aa25.92■■□□□ 1.74
CROT-202ENST00000412227 CUL9Q8IWT3 2517 aa25.92■■□□□ 1.74
CROT-202ENST00000412227 ARVCFO00192 962 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 ICAM1P05362 532 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 TOP1P11387 765 aaKnown RBP25.91■■□□□ 1.74
CROT-202ENST00000412227 SLC16A2P36021 539 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 BEX3Q00994 111 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 TTBK2Q6IQ55 1244 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 ZNF589Q86UQ0 364 aaPredicted RBP25.91■■□□□ 1.74
CROT-202ENST00000412227 TMEM47Q9BQJ4 181 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 TBX21Q9UL17 535 aa25.91■■□□□ 1.74
CROT-202ENST00000412227 CTAGE5O15320 804 aa25.9■■□□□ 1.74
CROT-202ENST00000412227 HAND2P61296 217 aa25.9■■□□□ 1.74
CROT-202ENST00000412227 CDX2Q99626 313 aaPredicted RBP25.9■■□□□ 1.74
CROT-202ENST00000412227 RANBP17Q9H2T7 1088 aaKnown RBP25.9■■□□□ 1.74
CROT-202ENST00000412227 TCP11L1Q9NUJ3 509 aa25.9■■□□□ 1.74
CROT-202ENST00000412227 DDX49Q9Y6V7 483 aaKnown RBP25.9■■□□□ 1.74
CROT-202ENST00000412227 ASTN1O14525 1302 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 ZMYM6O95789 1325 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 FRMPD2Q68DX3 1309 aaPredicted RBP25.89■■□□□ 1.74
CROT-202ENST00000412227 TLR3O15455 904 aaKnown RBP25.89■■□□□ 1.74
CROT-202ENST00000412227 NKX3-2P78367 333 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 SYDE2Q5VT97 1194 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 BTNL9Q6UXG8 535 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 EEPD1Q7L9B9 569 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 TLK2Q86UE8 772 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 AP5M1Q9H0R1 490 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 GPCPD1Q9NPB8 672 aa25.89■■□□□ 1.74
CROT-202ENST00000412227 GNEQ9Y223 722 aaKnown RBP25.89■■□□□ 1.74
CROT-202ENST00000412227 CCDC171Q6TFL3 1326 aa25.88■■□□□ 1.73
CROT-202ENST00000412227 AAMPQ13685 434 aa25.88■■□□□ 1.73
CROT-202ENST00000412227 B4GALNT3Q6L9W6 998 aa25.88■■□□□ 1.73
CROT-202ENST00000412227 MFSD5Q6N075 450 aa25.88■■□□□ 1.73
CROT-202ENST00000412227 MFSD6Q6ZSS7 791 aa25.88■■□□□ 1.73
CROT-202ENST00000412227 RWDD1Q9H446 243 aaPredicted RBP25.88■■□□□ 1.73
CROT-202ENST00000412227 PDGFCQ9NRA1 345 aa25.88■■□□□ 1.73
CROT-202ENST00000412227 DYNC1LI2O43237 492 aaPredicted RBP25.87■■□□□ 1.73
CROT-202ENST00000412227 SMPD1P17405 629 aa25.87■■□□□ 1.73
CROT-202ENST00000412227 AKNAD1Q5T1N1 836 aa25.87■■□□□ 1.73
CROT-202ENST00000412227 IQSEC1Q6DN90 963 aa25.87■■□□□ 1.73
CROT-202ENST00000412227 FBXO16Q8IX29 292 aaPredicted RBP25.87■■□□□ 1.73
CROT-202ENST00000412227 FAM126BQ8IXS8 530 aa25.87■■□□□ 1.73
CROT-202ENST00000412227 PURBQ96QR8 312 aaKnown RBP25.87■■□□□ 1.73
CROT-202ENST00000412227 TTYH1Q9H313 450 aaPredicted RBP25.87■■□□□ 1.73
CROT-202ENST00000412227 MYO9BQ13459 2157 aa25.87■■□□□ 1.73
CROT-202ENST00000412227 CABYRO75952 493 aa25.86■■□□□ 1.73
CROT-202ENST00000412227 MFAP1P55081 439 aaKnown RBP25.86■■□□□ 1.73
CROT-202ENST00000412227 PPIGQ13427 754 aaKnown RBP eCLIP25.86■■□□□ 1.73
CROT-202ENST00000412227 BAATQ14032 418 aaPredicted RBP25.86■■□□□ 1.73
CROT-202ENST00000412227 FSCN1Q16658 493 aaKnown RBP25.86■■□□□ 1.73
CROT-202ENST00000412227 TAPT1Q6NXT6 567 aa25.86■■□□□ 1.73
CROT-202ENST00000412227 CXCL17Q6UXB2 119 aa25.86■■□□□ 1.73
CROT-202ENST00000412227 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.86■■□□□ 1.73
CROT-202ENST00000412227 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.85■■□□□ 1.73
CROT-202ENST00000412227 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.85■■□□□ 1.73
CROT-202ENST00000412227 ZEB2O60315 1214 aa25.85■■□□□ 1.73
CROT-202ENST00000412227 PCP11498 1178 aaKnown RBP25.85■■□□□ 1.73
CROT-202ENST00000412227 SMC5Q8IY18 1101 aa25.85■■□□□ 1.73
CROT-202ENST00000412227 TMEM199Q8N511 208 aa25.85■■□□□ 1.73
CROT-202ENST00000412227 TTC14Q96N46 770 aa25.85■■□□□ 1.73
CROT-202ENST00000412227 PPP1R12CQ9BZL4 782 aa25.85■■□□□ 1.73
CROT-202ENST00000412227 VTA1Q9NP79 307 aa25.85■■□□□ 1.73
CROT-202ENST00000412227 ADD3Q9UEY8 706 aaKnown RBP25.85■■□□□ 1.73
CROT-202ENST00000412227 PDHBP11177 359 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 SDSP20132 328 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 PTGS1P23219 599 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 KIAA1211Q6ZU35 1233 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.84■■□□□ 1.73
CROT-202ENST00000412227 MORC4Q8TE76 937 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 MYLIPQ8WY64 445 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 RNF41Q9H4P4 317 aaPredicted RBP25.84■■□□□ 1.73
CROT-202ENST00000412227 Q9Y3F1 56 aa25.84■■□□□ 1.73
CROT-202ENST00000412227 TMEM265A0A087WTH1 108 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 PTPDC1A2A3K4 754 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 NFIBO00712 420 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 CD4P01730 458 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 CSF2RAP15509 400 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 ALDH5A1P51649 535 aaPredicted RBP25.83■■□□□ 1.73
CROT-202ENST00000412227 ITGA7Q13683 1181 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 CHD1LQ86WJ1 897 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 TBC1D10CQ8IV04 446 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 YTHDC1Q96MU7 727 aaKnown RBP25.83■■□□□ 1.73
CROT-202ENST00000412227 LAMA4Q16363 1823 aa25.83■■□□□ 1.73
CROT-202ENST00000412227 MYH6P13533 1939 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 ZNF543Q08ER8 600 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 TMEM240Q5SV17 173 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 TMEM63BQ5T3F8 832 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 PLEKHM2Q8IWE5 1019 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 SLC43A3Q8NBI5 491 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 MAFAQ8NHW3 353 aaPredicted RBP25.82■■□□□ 1.72
CROT-202ENST00000412227 ESR2Q92731 530 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 PNMA2Q9UL42 364 aa25.82■■□□□ 1.72
CROT-202ENST00000412227 C16orf59Q7L2K0 433 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms