RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 ZNF713Q8N859 430 aaPredicted RBP20.6■□□□□ 0.89
CXXC1-202ENST00000412036 CCDC12Q8WUD4 166 aaPredicted RBP20.6■□□□□ 0.89
CXXC1-202ENST00000412036 PSTPIP2Q9H939 334 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 CMA1P23946 247 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 FAM160A1Q05DH4 1040 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 NOL9Q5SY16 702 aaKnown RBP20.6■□□□□ 0.89
CXXC1-202ENST00000412036 RESP18Q5W5W9 173 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 FBXO11Q86XK2 927 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 KRI1Q8N9T8 703 aaKnown RBP20.6■□□□□ 0.89
CXXC1-202ENST00000412036 FUCA2Q9BTY2 467 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 AMNQ9BXJ7 453 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 CLSTN2Q9H4D0 955 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 AFG3L2Q9Y4W6 797 aa20.6■□□□□ 0.89
CXXC1-202ENST00000412036 PCNTO95613 3336 aa20.59■□□□□ 0.89
CXXC1-202ENST00000412036 EPSTI1Q96J88 318 aa20.59■□□□□ 0.89
CXXC1-202ENST00000412036 AGBL1Q96MI9 1066 aa20.59■□□□□ 0.89
CXXC1-202ENST00000412036 RPAP3Q9H6T3 665 aaPredicted RBP20.59■□□□□ 0.89
CXXC1-202ENST00000412036 SH2D4AQ9H788 454 aa20.59■□□□□ 0.89
CXXC1-202ENST00000412036 PICK1Q9NRD5 415 aa20.59■□□□□ 0.89
CXXC1-202ENST00000412036 SRPRBQ9Y5M8 271 aaKnown RBP20.59■□□□□ 0.89
CXXC1-202ENST00000412036 PTPRFP10586 1907 aa20.59■□□□□ 0.89
CXXC1-202ENST00000412036 HOXA13P31271 388 aaPredicted RBP20.58■□□□□ 0.89
CXXC1-202ENST00000412036 LETM2Q2VYF4 491 aa20.58■□□□□ 0.89
CXXC1-202ENST00000412036 PPP1R18Q6NYC8 613 aa20.58■□□□□ 0.89
CXXC1-202ENST00000412036 POTEEQ6S8J3 1075 aa20.58■□□□□ 0.89
CXXC1-202ENST00000412036 RBSNQ9H1K0 784 aa20.58■□□□□ 0.89
CXXC1-202ENST00000412036 NOL7Q9UMY1 257 aaKnown RBP20.58■□□□□ 0.89
CXXC1-202ENST00000412036 TDP2O95551 362 aa20.58■□□□□ 0.88
CXXC1-202ENST00000412036 TRAPPC10P48553 1259 aa20.58■□□□□ 0.88
CXXC1-202ENST00000412036 NONOQ15233 471 aaKnown RBP eCLIP20.58■□□□□ 0.88
CXXC1-202ENST00000412036 LRSAM1Q6UWE0 723 aa20.58■□□□□ 0.88
CXXC1-202ENST00000412036 ZC3H15Q8WU90 426 aaKnown RBP20.58■□□□□ 0.88
CXXC1-202ENST00000412036 PANK2Q9BZ23 570 aa20.58■□□□□ 0.88
CXXC1-202ENST00000412036 NUP62CLQ9H1M0 184 aa20.58■□□□□ 0.88
CXXC1-202ENST00000412036 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
CXXC1-202ENST00000412036 SLC37A4O43826 429 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 PEX10O60683 326 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 CUTAO60888 179 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 CDC25AP30304 524 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 MAP3K9P80192 1104 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 FAM177A1Q8N128 213 aaPredicted RBP20.57■□□□□ 0.88
CXXC1-202ENST00000412036 CUL5Q93034 780 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 GJA10Q969M2 543 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 TANGO6Q9C0B7 1094 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 GINM1Q9NU53 330 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 FEM1BQ9UK73 627 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 PLA2G6O60733 806 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 KRT25Q7Z3Z0 450 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 UIMC1Q96RL1 719 aa20.57■□□□□ 0.88
CXXC1-202ENST00000412036 FAM237AA0A1B0GTK4 181 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 VWA3AA6NCI4 1184 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 RBM43Q6ZSC3 357 aaKnown RBP20.56■□□□□ 0.88
CXXC1-202ENST00000412036 CHURC1Q8WUH1 139 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 LPAR1Q92633 364 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 HOOK2Q96ED9 719 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 ELP3Q9H9T3 547 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 RRAGCQ9HB90 399 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 CCNT1O60563 726 aaKnown RBP20.56■□□□□ 0.88
CXXC1-202ENST00000412036 ZNF202O95125 648 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 CCDC73Q6ZRK6 1079 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 SLF1Q9BQI6 1058 aa20.56■□□□□ 0.88
CXXC1-202ENST00000412036 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
CXXC1-202ENST00000412036 PP2D1A8MPX8 630 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 FOXN1O15353 648 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 NEK8Q86SG6 692 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 LDHDQ86WU2 507 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 DDX19AQ9NUU7 478 aaKnown RBP20.55■□□□□ 0.88
CXXC1-202ENST00000412036 FLOT1O75955 427 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 LONRF3Q496Y0 759 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 TREML2Q5T2D2 321 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
CXXC1-202ENST00000412036 IQCA1LA6NCM1 817 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 IRF6O14896 467 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 FAM160B2Q86V87 743 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 JMYQ8N9B5 988 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 CRYGNQ8WXF5 182 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 SYMPKQ92797 1274 aaKnown RBP20.54■□□□□ 0.88
CXXC1-202ENST00000412036 SYAP1Q96A49 352 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-202ENST00000412036 TNMDQ9H2S6 317 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 RAVER2Q9HCJ3 691 aaKnown RBP20.54■□□□□ 0.88
CXXC1-202ENST00000412036 PPP1R9AQ9ULJ8 1098 aa20.54■□□□□ 0.88
CXXC1-202ENST00000412036 MORC2Q9Y6X9 1032 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-202ENST00000412036 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.881e-6■■■■□ 22.3
CXXC1-202ENST00000412036 PDILTQ8N807 584 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 LRRC15Q8TF66 581 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 SLC38A10Q9HBR0 1119 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 NMRK2Q9NPI5 230 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 KCNH3Q9ULD8 1083 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 CEP131Q9UPN4 1083 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 GOLGA6L3A6NEY3 463 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 MRPL12P52815 198 aaKnown RBP20.53■□□□□ 0.88
CXXC1-202ENST00000412036 CPXCR1Q8N123 301 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 PRPF38AQ8NAV1 312 aaKnown RBP20.53■□□□□ 0.88
CXXC1-202ENST00000412036 RIPK3Q9Y572 518 aa20.53■□□□□ 0.88
CXXC1-202ENST00000412036 NFIBO00712 420 aa20.52■□□□□ 0.88
CXXC1-202ENST00000412036 PPP1R12BO60237 982 aaPredicted RBP20.52■□□□□ 0.88
CXXC1-202ENST00000412036 GJA5P36382 358 aa20.52■□□□□ 0.88
CXXC1-202ENST00000412036 RNF214Q8ND24 703 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms