RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 NLRP5P59047 1200 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 FAM110CQ1W6H9 321 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 SNRNP48Q6IEG0 339 aaKnown RBP21.45■■□□□ 1.02
CDC42-204ENST00000411827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.45■■□□□ 1.021e-7■■□□□ 12.5
CDC42-204ENST00000411827 CPXCR1Q8N123 301 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 CUL5Q93034 780 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 PHF20Q9BVI0 1012 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 SPATC1LQ9H0A9 340 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 MROH8Q9H579 483 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 RAVER2Q9HCJ3 691 aaKnown RBP21.45■■□□□ 1.02
CDC42-204ENST00000411827 RBPJLQ9UBG7 517 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 BAZ2BQ9UIF8 2168 aaKnown RBP21.44■■□□□ 1.02
CDC42-204ENST00000411827 STX6O43752 255 aa21.44■■□□□ 1.02
CDC42-204ENST00000411827 PPP1R11O60927 126 aaPredicted RBP21.44■■□□□ 1.02
CDC42-204ENST00000411827 CYP2C8P10632 490 aa21.44■■□□□ 1.02
CDC42-204ENST00000411827 KRT40Q6A162 431 aa21.44■■□□□ 1.02
CDC42-204ENST00000411827 SPRYD3Q8NCJ5 442 aa21.44■■□□□ 1.02
CDC42-204ENST00000411827 PSTPIP2Q9H939 334 aa21.44■■□□□ 1.02
CDC42-204ENST00000411827 RIC8AQ9NPQ8 531 aa21.44■■□□□ 1.02
CDC42-204ENST00000411827 MYH6P13533 1939 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 SMCO2A6NFE2 343 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 PIK3CDO00329 1044 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 AOC2O75106 756 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 PPFIA3O75145 1194 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 MMP1P03956 469 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 ADCY7P51828 1080 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 ERVK-9P63128 1117 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 ERVK-24P63145 666 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 GHRHRQ02643 423 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 GPKOWQ92917 476 aaPredicted RBP eCLIP21.43■■□□□ 1.022e-6■■□□□ 13.7
CDC42-204ENST00000411827 AGBL1Q96MI9 1066 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 VPS54Q9P1Q0 977 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 PCDHA4Q9UN74 947 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 A0A0G2JMZ2 1700 aa21.43■■□□□ 1.02
CDC42-204ENST00000411827 FOSP01100 380 aaPredicted RBP21.42■■□□□ 1.02
CDC42-204ENST00000411827 ALAS1P13196 640 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 DDIT3P35638 169 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 MAP2K1Q02750 393 aaPredicted RBP21.42■■□□□ 1.02
CDC42-204ENST00000411827 PLS1Q14651 629 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 USH1GQ495M9 461 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 CCAR1Q8IX12 1150 aaKnown RBP21.42■■□□□ 1.02
CDC42-204ENST00000411827 COA7Q96BR5 231 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 TRERF1Q96PN7 1200 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 PAGR1Q9BTK6 254 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 FOXP1Q9H334 677 aaPredicted RBP21.42■■□□□ 1.02
CDC42-204ENST00000411827 ZSCAN16Q9H4T2 348 aaPredicted RBP21.42■■□□□ 1.02
CDC42-204ENST00000411827 ACAD9Q9H845 621 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 SAGE1Q9NXZ1 904 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 BTBD7Q9P203 1132 aa21.42■■□□□ 1.02
CDC42-204ENST00000411827 ADGRA2Q96PE1 1338 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 MAPK4P31152 587 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 KRT2P35908 639 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 SNAP25P60880 206 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 AIFM3Q96NN9 605 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 RNF146Q9NTX7 359 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 CHMP5Q9NZZ3 219 aa21.41■■□□□ 1.02
CDC42-204ENST00000411827 THSD7BQ9C0I4 1608 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 PFASO15067 1338 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 GCOM1H8Y6P7 765 aaPredicted RBP21.4■■□□□ 1.02
CDC42-204ENST00000411827 STRNO43815 780 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 CNMDO75829 334 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 POLR2MP0CAP2 368 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 BCRP11274 1271 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 GNL2Q13823 731 aaKnown RBP21.4■■□□□ 1.02
CDC42-204ENST00000411827 C17orf99Q6UX52 265 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 BLIDQ8IZY5 108 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 ABRAQ8N0Z2 381 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 REXO1Q8N1G1 1221 aaKnown RBP21.4■■□□□ 1.02
CDC42-204ENST00000411827 ZIC5Q96T25 663 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 MOV10L1Q9BXT6 1211 aaKnown RBP21.4■■□□□ 1.02
CDC42-204ENST00000411827 ATP6V1DQ9Y5K8 247 aa21.4■■□□□ 1.02
CDC42-204ENST00000411827 VPS37CA5D8V6 355 aaPredicted RBP21.39■■□□□ 1.01
CDC42-204ENST00000411827 CRHR2Q13324 411 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 AP3B2Q13367 1082 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 NOM1Q5C9Z4 860 aaKnown RBP21.39■■□□□ 1.01
CDC42-204ENST00000411827 POTEEQ6S8J3 1075 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 BRAPQ7Z569 592 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 ANKRD13CQ8N6S4 541 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 EHMT1Q9H9B1 1298 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 TXNRD2Q9NNW7 524 aa21.39■■□□□ 1.01
CDC42-204ENST00000411827 ZSCAN22P10073 491 aaPredicted RBP21.38■■□□□ 1.01
CDC42-204ENST00000411827 U2AF2P26368 475 aaKnown RBP eCLIP21.38■■□□□ 1.013e-11■□□□□ 10.5
CDC42-204ENST00000411827 TYW1BQ6NUM6 668 aa21.38■■□□□ 1.01
CDC42-204ENST00000411827 KRT25Q7Z3Z0 450 aa21.38■■□□□ 1.01
CDC42-204ENST00000411827 DIS3L2Q8IYB7 885 aaKnown RBP21.38■■□□□ 1.01
CDC42-204ENST00000411827 CLEC4DQ8WXI8 215 aa21.38■■□□□ 1.01
CDC42-204ENST00000411827 BEGAINQ9BUH8 593 aa21.38■■□□□ 1.01
CDC42-204ENST00000411827 MTMR6Q9Y217 621 aa21.38■■□□□ 1.01
CDC42-204ENST00000411827 ERCC3P19447 782 aa21.37■■□□□ 1.01
CDC42-204ENST00000411827 HSD17B4P51659 736 aa21.37■■□□□ 1.01
CDC42-204ENST00000411827 NCAPG2Q86XI2 1143 aa21.37■■□□□ 1.01
CDC42-204ENST00000411827 KCNJ14Q9UNX9 436 aa21.37■■□□□ 1.01
CDC42-204ENST00000411827 RIPK3Q9Y572 518 aa21.37■■□□□ 1.01
CDC42-204ENST00000411827 IVNS1ABPQ9Y6Y0 642 aa21.37■■□□□ 1.01
CDC42-204ENST00000411827 LOC102724159A0A0B4J2E5 919 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 BRD1O95696 1058 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 FCER1AP12319 257 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 KCTD2Q14681 263 aa21.36■■□□□ 1.01
CDC42-204ENST00000411827 PWP2Q15269 919 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms