RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GPR153Q6NV75 609 aa26.25■■□□□ 1.79
MSH6-202ENST00000411819 BTNL9Q6UXG8 535 aa26.25■■□□□ 1.79
MSH6-202ENST00000411819 TRIM43Q96BQ3 446 aaPredicted RBP26.25■■□□□ 1.79
MSH6-202ENST00000411819 ZKSCAN3Q9BRR0 538 aa26.25■■□□□ 1.79
MSH6-202ENST00000411819 CYP39A1Q9NYL5 469 aa26.25■■□□□ 1.79
MSH6-202ENST00000411819 NOL8Q76FK4 1167 aaKnown RBP26.24■■□□□ 1.79
MSH6-202ENST00000411819 Q7L0L9 218 aa26.24■■□□□ 1.79
MSH6-202ENST00000411819 DEFB123Q8N688 67 aa26.24■■□□□ 1.79
MSH6-202ENST00000411819 TTC14Q96N46 770 aa26.24■■□□□ 1.79
MSH6-202ENST00000411819 KATNBL1Q9H079 304 aa26.24■■□□□ 1.79
MSH6-202ENST00000411819 CST5P28325 142 aaPredicted RBP26.23■■□□□ 1.79
MSH6-202ENST00000411819 PCSK9Q8NBP7 692 aaKnown RBP26.23■■□□□ 1.79
MSH6-202ENST00000411819 GLT1D1Q96MS3 346 aa26.23■■□□□ 1.79
MSH6-202ENST00000411819 DDX49Q9Y6V7 483 aaKnown RBP26.23■■□□□ 1.79
MSH6-202ENST00000411819 ASTN1O14525 1302 aa26.22■■□□□ 1.79
MSH6-202ENST00000411819 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.22■■□□□ 1.79
MSH6-202ENST00000411819 ASGR1P07306 291 aa26.22■■□□□ 1.79
MSH6-202ENST00000411819 GJA9P57773 515 aa26.22■■□□□ 1.79
MSH6-202ENST00000411819 TNFAIP2Q03169 654 aa26.22■■□□□ 1.79
MSH6-202ENST00000411819 ZNF543Q08ER8 600 aa26.22■■□□□ 1.79
MSH6-202ENST00000411819 CCSAPQ6IQ19 270 aaPredicted RBP26.22■■□□□ 1.79
MSH6-202ENST00000411819 VTI1AQ96AJ9 217 aa26.22■■□□□ 1.79
MSH6-202ENST00000411819 UPF3AQ9H1J1 476 aaKnown RBP26.22■■□□□ 1.79
MSH6-202ENST00000411819 KDM4AO75164 1064 aa26.21■■□□□ 1.79
MSH6-202ENST00000411819 IRX6P78412 446 aaPredicted RBP26.21■■□□□ 1.79
MSH6-202ENST00000411819 GNASQ5JWF2 1037 aa26.21■■□□□ 1.79
MSH6-202ENST00000411819 EEPD1Q7L9B9 569 aa26.21■■□□□ 1.79
MSH6-202ENST00000411819 IQCA1Q86XH1 822 aa26.21■■□□□ 1.79
MSH6-202ENST00000411819 FBXO16Q8IX29 292 aaPredicted RBP26.21■■□□□ 1.79
MSH6-202ENST00000411819 DSCC1Q9BVC3 393 aa26.21■■□□□ 1.79
MSH6-202ENST00000411819 PTPDC1A2A3K4 754 aa26.2■■□□□ 1.78
MSH6-202ENST00000411819 DCDC2CA8MYV0 355 aa26.2■■□□□ 1.78
MSH6-202ENST00000411819 NFIBO00712 420 aa26.2■■□□□ 1.78
MSH6-202ENST00000411819 RAG1P15918 1043 aa26.2■■□□□ 1.78
MSH6-202ENST00000411819 IMMTQ16891 758 aaKnown RBP26.2■■□□□ 1.78
MSH6-202ENST00000411819 PURBQ96QR8 312 aaKnown RBP26.2■■□□□ 1.78
MSH6-202ENST00000411819 TMEM39AQ9NV64 488 aa26.2■■□□□ 1.78
MSH6-202ENST00000411819 B4E1Z4 1266 aa26.19■■□□□ 1.78
MSH6-202ENST00000411819 SNHG28P0DPA3 235 aa26.19■■□□□ 1.78
MSH6-202ENST00000411819 BEX3Q00994 111 aa26.19■■□□□ 1.78
MSH6-202ENST00000411819 BAATQ14032 418 aaPredicted RBP26.19■■□□□ 1.78
MSH6-202ENST00000411819 SHHQ15465 462 aa26.19■■□□□ 1.78
MSH6-202ENST00000411819 C9orf50Q5SZB4 431 aa26.19■■□□□ 1.78
MSH6-202ENST00000411819 TLK2Q86UE8 772 aa26.19■■□□□ 1.78
MSH6-202ENST00000411819 ELP1O95163 1332 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 GOLGA8HP0CJ92 632 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 ITGB8P26012 769 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 PDE4AP27815 886 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 NT5C2P49902 561 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 CCDC178Q5BJE1 867 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 GPATCH4Q5T3I0 446 aaKnown RBP26.18■■□□□ 1.78
MSH6-202ENST00000411819 ANKRD33Q7Z3H0 272 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 DGKHQ86XP1 1220 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 PNMA1Q8ND90 353 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 KAT14Q9H8E8 782 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 ADD3Q9UEY8 706 aaKnown RBP26.18■■□□□ 1.78
MSH6-202ENST00000411819 CTNNA3Q9UI47 895 aa26.18■■□□□ 1.78
MSH6-202ENST00000411819 MROH7Q68CQ1 1323 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 A0A0U1RQG5 324 aaPredicted RBP26.17■■□□□ 1.78
MSH6-202ENST00000411819 KIAA0355O15063 1070 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 FAAP100Q0VG06 881 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 TTC22Q5TAA0 569 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 SLC30A10Q6XR72 485 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 TOX2Q96NM4 488 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 AP5M1Q9H0R1 490 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 PDGFCQ9NRA1 345 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 PNMA2Q9UL42 364 aa26.17■■□□□ 1.78
MSH6-202ENST00000411819 GSPT1P15170 499 aaKnown RBP26.16■■□□□ 1.78
MSH6-202ENST00000411819 CALML3P27482 149 aa26.16■■□□□ 1.78
MSH6-202ENST00000411819 ALDH5A1P51649 535 aaPredicted RBP26.16■■□□□ 1.78
MSH6-202ENST00000411819 ZSCAN10Q96SZ4 725 aaPredicted RBP26.16■■□□□ 1.78
MSH6-202ENST00000411819 IL25Q9H293 177 aa26.16■■□□□ 1.78
MSH6-202ENST00000411819 VTA1Q9NP79 307 aa26.16■■□□□ 1.78
MSH6-202ENST00000411819 WDR19Q8NEZ3 1342 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 CTAGE5O15320 804 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 SMPD1P17405 629 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 PTGS1P23219 599 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 USH1GQ495M9 461 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 RNF207Q6ZRF8 634 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 KRT23Q9C075 422 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 UBA5Q9GZZ9 404 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 CPVLQ9H3G5 476 aa26.15■■□□□ 1.78
MSH6-202ENST00000411819 GNEQ9Y223 722 aaKnown RBP26.15■■□□□ 1.78
MSH6-202ENST00000411819 TNKSO95271 1327 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 DYNC1LI2O43237 492 aaPredicted RBP26.14■■□□□ 1.78
MSH6-202ENST00000411819 FPGSQ05932 587 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 TAPT1Q6NXT6 567 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 KIAA1211Q6ZU35 1233 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 CLEC4DQ8WXI8 215 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 CNNM2Q9H8M5 875 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 MTMR10Q9NXD2 777 aa26.14■■□□□ 1.78
MSH6-202ENST00000411819 ARVCFO00192 962 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 FSCN1Q16658 493 aaKnown RBP26.13■■□□□ 1.77
MSH6-202ENST00000411819 IQSEC1Q6DN90 963 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 CXCL17Q6UXB2 119 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 ENAHQ8N8S7 591 aaPredicted RBP26.13■■□□□ 1.77
MSH6-202ENST00000411819 MORC4Q8TE76 937 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 UBAC1Q9BSL1 405 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 ZSWIM5Q9P217 1185 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 MYH6P13533 1939 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms