RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SMCHD1A6NHR9 2005 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-210ENST00000409954 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
MCF2L-210ENST00000409954 ASGR1P07306 291 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 CDK7P50613 346 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 SYDE2Q5VT97 1194 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.32
MCF2L-210ENST00000409954 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 SLC17A8Q8NDX2 589 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 EXOC6Q8TAG9 804 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 LENG1Q96BZ8 264 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-210ENST00000409954 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 Q9Y3F1 56 aa17.08■□□□□ 0.32
MCF2L-210ENST00000409954 ZEB2O60315 1214 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 CABYRO75952 493 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 SLC16A2P36021 539 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 SNAP25P60880 206 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 HAND2P61296 217 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 Q7L0L9 218 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 AP5M1Q9H0R1 490 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 DIAPH3Q9NSV4 1193 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
MCF2L-210ENST00000409954 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-210ENST00000409954 ARVCFO00192 962 aa17.06■□□□□ 0.32
MCF2L-210ENST00000409954 PDHBP11177 359 aa17.06■□□□□ 0.32
MCF2L-210ENST00000409954 GPATCH4Q5T3I0 446 aaKnown RBP17.06■□□□□ 0.32
MCF2L-210ENST00000409954 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
MCF2L-210ENST00000409954 NSMFQ6X4W1 530 aa17.06■□□□□ 0.32
MCF2L-210ENST00000409954 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
MCF2L-210ENST00000409954 MORC4Q8TE76 937 aa17.06■□□□□ 0.32
MCF2L-210ENST00000409954 MAF1Q9H063 256 aa17.06■□□□□ 0.32
MCF2L-210ENST00000409954 MYADML2A6NDP7 307 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 TIMP1P01033 207 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 SNHG28P0DPA3 235 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 ITGB8P26012 769 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 SMAD3P84022 425 aaKnown RBP17.05■□□□□ 0.32
MCF2L-210ENST00000409954 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-210ENST00000409954 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
MCF2L-210ENST00000409954 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 GNEQ9Y223 722 aaKnown RBP17.05■□□□□ 0.32
MCF2L-210ENST00000409954 MYH4Q9Y623 1939 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 SZT2Q5T011 3432 aa17.05■□□□□ 0.32
MCF2L-210ENST00000409954 B4DLN1 442 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 CTAGE5O15320 804 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 TLR3O15455 904 aaKnown RBP17.04■□□□□ 0.32
MCF2L-210ENST00000409954 DYNC1LI2O43237 492 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-210ENST00000409954 ADCY6O43306 1168 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
MCF2L-210ENST00000409954 FPGSQ05932 587 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 TAPT1Q6NXT6 567 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
MCF2L-210ENST00000409954 FRMPD2Q68DX3 1309 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-210ENST00000409954 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
MCF2L-210ENST00000409954 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-210ENST00000409954 SMPD1P17405 629 aa17.03■□□□□ 0.32
MCF2L-210ENST00000409954 IRX5P78411 483 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-210ENST00000409954 IMMTQ16891 758 aaKnown RBP17.03■□□□□ 0.32
MCF2L-210ENST00000409954 ZNF697Q5TEC3 545 aa17.03■□□□□ 0.32
MCF2L-210ENST00000409954 MFSD5Q6N075 450 aa17.03■□□□□ 0.32
MCF2L-210ENST00000409954 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
MCF2L-210ENST00000409954 PLXNA1Q9UIW2 1896 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 FSCN1Q16658 493 aaKnown RBP17.02■□□□□ 0.32
MCF2L-210ENST00000409954 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 RASGRP2Q7LDG7 609 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 TLK2Q86UE8 772 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 SLC43A3Q8NBI5 491 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 DNERQ8NFT8 737 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 KRT23Q9C075 422 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 KAT14Q9H8E8 782 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 PDGFCQ9NRA1 345 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 TBX21Q9UL17 535 aa17.02■□□□□ 0.32
MCF2L-210ENST00000409954 ASTN1O14525 1302 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-210ENST00000409954 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-210ENST00000409954 NFIBO00712 420 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 KDM4AO75164 1064 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 ALDH5A1P51649 535 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-210ENST00000409954 BEX3Q00994 111 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.311e-8■■■□□ 15.9
MCF2L-210ENST00000409954 DUSP28Q4G0W2 176 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 TMEM199Q8N511 208 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 CLEC4DQ8WXI8 215 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
MCF2L-210ENST00000409954 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-210ENST00000409954 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
MCF2L-210ENST00000409954 ZSWIM5Q9P217 1185 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms