RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 ABCB11O95342 1321 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 POSTNQ15063 836 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 ATG4CQ96DT6 458 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 DRC1Q96MC2 740 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 ANO3Q9BYT9 981 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.36
SNX13-202ENST00000409604 HS2ST1Q7LGA3 356 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.37
SNX13-202ENST00000409604 SPAG5Q96R06 1193 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 MRC1P22897 1456 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 MACROD2A1Z1Q3 448 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 HAUS3Q68CZ6 603 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 LDHDQ86WU2 507 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 ZDHHC15Q96MV8 337 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
SNX13-202ENST00000409604 PCDHA5Q9Y5H7 936 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
SNX13-202ENST00000409604 MYO9BQ13459 2157 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 CDR1P51861 262 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 YDJCA8MPS7 323 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 PDHBP11177 359 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 RESTQ13127 1097 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 MNS1Q8NEH6 495 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 ORC4O43929 436 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 PEX10O60683 326 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 YEATS4O95619 227 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 EGFRP00533 1210 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 OSBPP22059 807 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 ARHGAP29Q52LW3 1261 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
SNX13-202ENST00000409604 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 CRACR2AQ9BSW2 395 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 PCDHA6Q9UN73 950 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 PCDHA8Q9Y5H6 950 aa12.76□□□□□ -0.37
SNX13-202ENST00000409604 CYP2J2P51589 502 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 LRMPQ12912 555 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 BIRC3Q13489 604 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 CCDC65Q8IXS2 484 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 TAB2Q9NYJ8 693 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
SNX13-202ENST00000409604 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
SNX13-202ENST00000409604 UBXN1Q04323 297 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 RAPGEF1Q13905 1077 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 SLC39A14Q15043 492 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 GAS2L3Q86XJ1 694 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 ZNF280CQ8ND82 737 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 RIC1Q4ADV7 1423 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 CTDNEP1O95476 244 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 PFKFB3Q16875 520 aaPredicted RBP12.75□□□□□ -0.37
SNX13-202ENST00000409604 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 RGS22Q8NE09 1264 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
SNX13-202ENST00000409604 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
SNX13-202ENST00000409604 MCM6Q14566 821 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 USP49Q70CQ1 688 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 MCF2L2Q86YR7 1114 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 C17orf53Q8N3J3 647 aaPredicted RBP12.74□□□□□ -0.37
SNX13-202ENST00000409604 CLSTN2Q9H4D0 955 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 SEPT9Q9UHD8 586 aaPredicted RBP12.74□□□□□ -0.37
SNX13-202ENST00000409604 LRRIQ4A6NIV6 560 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 ENTPD3O75355 529 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
SNX13-202ENST00000409604 PPP4CP60510 307 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 MTERF2Q49AM1 385 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
SNX13-202ENST00000409604 GRIPAP1Q4V328 841 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 STXBP4Q6ZWJ1 553 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 CCDC127Q96BQ5 260 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 FOXP1Q9H334 677 aaPredicted RBP12.74□□□□□ -0.37
SNX13-202ENST00000409604 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
SNX13-202ENST00000409604 TROAPQ12815 778 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 GRM4Q14833 912 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 ESPNB1AK53 854 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 RGL2O15211 777 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 CYP2B6P20813 491 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 BANK1Q8NDB2 785 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
SNX13-202ENST00000409604 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
SNX13-202ENST00000409604 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms