RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 JAG1P78504 1218 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 QRICH1Q2TAL8 776 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 SPDYE2Q495Y8 402 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 DALRD3Q5D0E6 543 aaKnown RBP23.4■■□□□ 1.34
USP39-203ENST00000409470 CT47A1Q5JQC4 288 aaPredicted RBP23.4■■□□□ 1.34
USP39-203ENST00000409470 DNTTIP2Q5QJE6 756 aaKnown RBP23.4■■□□□ 1.34
USP39-203ENST00000409470 TMC6Q7Z403 805 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 GMCL1P1Q8NEA9 526 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 AGBL3Q8NEM8 1001 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 PSTPIP2Q9H939 334 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 GSDMDP57764 484 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 CUL4BQ13620 913 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 RRP1BQ14684 758 aaKnown RBP23.4■■□□□ 1.34
USP39-203ENST00000409470 POTEDQ86YR6 584 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 MTRQ99707 1265 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 SPTLC3Q9NUV7 552 aa23.4■■□□□ 1.34
USP39-203ENST00000409470 NDUFB10O96000 172 aa23.39■■□□□ 1.34
USP39-203ENST00000409470 IKQ13123 557 aaPredicted RBP23.39■■□□□ 1.34
USP39-203ENST00000409470 ARID5BQ14865 1188 aa23.39■■□□□ 1.34
USP39-203ENST00000409470 CDC37Q16543 378 aaPredicted RBP23.39■■□□□ 1.34
USP39-203ENST00000409470 CDK11BP21127 795 aaKnown RBP23.38■■□□□ 1.33
USP39-203ENST00000409470 TECP42680 631 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 KLHL10Q6JEL2 608 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 CABP7Q86V35 215 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 GMCL1Q96IK5 515 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 PLIN2Q99541 437 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 NUP88Q99567 741 aaPredicted RBP23.38■■□□□ 1.33
USP39-203ENST00000409470 PPP1R1BQ9UD71 204 aaPredicted RBP23.38■■□□□ 1.33
USP39-203ENST00000409470 CXCL9Q07325 125 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 CALCRLQ16602 461 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 HSP90AA4PQ58FG1 418 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 RMND1Q9NWS8 449 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 PCDHA1Q9Y5I3 950 aa23.38■■□□□ 1.33
USP39-203ENST00000409470 CLK2P49760 499 aaKnown RBP23.37■■□□□ 1.33
USP39-203ENST00000409470 NAALADL2Q58DX5 795 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 SMYD4Q8IYR2 804 aaPredicted RBP23.37■■□□□ 1.33
USP39-203ENST00000409470 DPF2Q92785 391 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 GLT8D2Q9H1C3 349 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 TAOK3Q9H2K8 898 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 CNTNAP1P78357 1384 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 TDP2O95551 362 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 RPN1P04843 607 aaKnown RBP23.37■■□□□ 1.33
USP39-203ENST00000409470 CD44P16070 742 aaKnown RBP23.37■■□□□ 1.33
USP39-203ENST00000409470 TXKP42681 527 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 MTMR14Q8NCE2 650 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 JDP2Q8WYK2 163 aa23.37■■□□□ 1.33
USP39-203ENST00000409470 BMP3P12645 472 aa23.36■■□□□ 1.33
USP39-203ENST00000409470 MED15Q96RN5 788 aa23.36■■□□□ 1.33
USP39-203ENST00000409470 MTFR1LQ9H019 292 aa23.36■■□□□ 1.33
USP39-203ENST00000409470 ARHGEF10LQ9HCE6 1279 aa23.36■■□□□ 1.33
USP39-203ENST00000409470 R3HCC1Q9Y3T6 440 aaKnown RBP23.36■■□□□ 1.33
USP39-203ENST00000409470 SYNRGQ9UMZ2 1314 aa23.36■■□□□ 1.33
USP39-203ENST00000409470 ARFGEF1Q9Y6D6 1849 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 TMEM232C9JQI7 657 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 SLC37A4O43826 429 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 FKBP1CQ5VVH2 108 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 CIAPIN1Q6FI81 312 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 CCDC125Q86Z20 511 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 MTMR9Q96QG7 549 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 A0A1W2PRG0 241 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 PPP1R3GB7ZBB8 358 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 ZNF18P17022 549 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 STX17P56962 302 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 TMEM266Q2M3C6 531 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 SYDE2Q5VT97 1194 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 TMEM39BQ9GZU3 492 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 CUEDC2Q9H467 287 aa23.35■■□□□ 1.33
USP39-203ENST00000409470 PLCG1P19174 1290 aa23.34■■□□□ 1.33
USP39-203ENST00000409470 SPATA1Q5VX52 437 aa23.34■■□□□ 1.33
USP39-203ENST00000409470 SAMSN1Q9NSI8 373 aaKnown RBP23.34■■□□□ 1.33
USP39-203ENST00000409470 SYNPO2Q9UMS6 1093 aa23.34■■□□□ 1.33
USP39-203ENST00000409470 EDIL3O43854 480 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 SKILP12757 684 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 SNAP25P60880 206 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 PPP4R3AQ6IN85 833 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 SPICE1Q8N0Z3 855 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 IGSF22Q8N9C0 903 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 CCDC150Q8NCX0 1101 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 AMNQ9BXJ7 453 aa23.33■■□□□ 1.33
USP39-203ENST00000409470 USP17L15C9J2P7 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L13C9JLJ4 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L11C9JVI0 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L18D6R9N7 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L22D6RA61 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L17D6RBQ6 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L19D6RCP7 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L20D6RJB6 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 MYL1P05976 194 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L24Q0WX57 530 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 DHX8Q14562 1220 aaKnown RBP23.33■■□□□ 1.32
USP39-203ENST00000409470 ZNF658Q5TYW1 1059 aaPredicted RBP23.33■■□□□ 1.32
USP39-203ENST00000409470 USP17L6PQ6QN14 398 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 FAM83AQ86UY5 434 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 CALML4Q96GE6 196 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 RAB34Q9BZG1 259 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 MAGEF1Q9HAY2 307 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 KBTBD4Q9NVX7 518 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 LRWD1Q9UFC0 647 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 CTNND2Q9UQB3 1225 aa23.33■■□□□ 1.32
USP39-203ENST00000409470 ECE1P42892 770 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms