RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 OSBPP22059 807 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 LONRF3Q496Y0 759 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 SLFN13Q68D06 897 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 OTUD6AQ7L8S5 288 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 METTL13Q8N6R0 699 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 RPN1P04843 607 aaKnown RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 CUL4AQ13619 759 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 PPP1R21Q6ZMI0 780 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 GSDMAQ96QA5 445 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 TRIM31Q9BZY9 425 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 FOXP1Q9H334 677 aaPredicted RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 FAM207AQ9NSI2 230 aaPredicted RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 SCG2P13521 617 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 HSPA1LP34931 641 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 CCNA1P78396 465 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 RETREG2Q8NC44 543 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 GAS7O60861 476 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 MYL1P05976 194 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 GNGT1P63211 74 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 GRAPQ13588 217 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 KCTD2Q14681 263 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 PDIA3P30101 505 aaKnown RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 MIER3Q7Z3K6 550 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 MCF2L2Q86YR7 1114 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 ARHGEF2Q92974 986 aaKnown RBP13.39□□□□□ -0.27
PXMP4-203ENST00000409299 CAPS2Q9BXY5 557 aa13.39□□□□□ -0.27
PXMP4-203ENST00000409299 KRT15P19012 456 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 NELFCDQ8IXH7 590 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 ATP2A3Q93084 1043 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 JCADQ9P266 1359 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 GOLGA8HP0CJ92 632 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 NEK8Q86SG6 692 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 CCDC89Q8N998 374 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
PXMP4-203ENST00000409299 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 MAN1A1P33908 653 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 TPH2Q8IWU9 490 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 RNF169Q8NCN4 708 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 PSTPIP2Q9H939 334 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 KRIT1O00522 736 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 DAPK3O43293 454 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 EEF1GP26641 437 aaKnown RBP13.38□□□□□ -0.27
PXMP4-203ENST00000409299 SLC8A1P32418 973 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 STX2P32856 288 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 SLC39A14Q15043 492 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 PNMA1Q8ND90 353 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
PXMP4-203ENST00000409299 SH2D4BQ5SQS7 431 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 SUSD4Q5VX71 490 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 SDCCAG8Q86SQ7 713 aaPredicted RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 RNF34Q969K3 372 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 KLHL14Q9P2G3 628 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 RAB20Q9NX57 234 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 NT5C2P49902 561 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 NDUFA8P51970 172 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 COPB1P53618 953 aaKnown RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 ANKRD20A3Q5VUR7 823 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 AK8Q96MA6 479 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 MIS12Q9H081 205 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 ARHGAP31Q2M1Z3 1444 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 SARNPP82979 210 aaKnown RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 ZMYM1Q5SVZ6 1142 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 FBXO18Q8NFZ0 1043 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 PANK4Q9NVE7 773 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 CDC42BPGQ6DT37 1551 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 FMNL1O95466 1100 aaPredicted RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
PXMP4-203ENST00000409299 CMTR1Q8N1G2 835 aaKnown RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 DHTKD1Q96HY7 919 aaPredicted RBP13.37□□□□□ -0.27
PXMP4-203ENST00000409299 FANCLQ9NW38 375 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms