RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
ATG9A-203ENST00000409033 SOWAHDA6NJG2 315 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 CASQ1P31415 396 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 CCZ1BP86790 482 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 CCZ1P86791 482 aaPredicted RBP14.05□□□□□ -0.16
ATG9A-203ENST00000409033 AMPD3Q01432 767 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 ELF2Q15723 593 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 UBXN4Q92575 508 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 PPP1R13BQ96KQ4 1090 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 ZNHIT6Q9NWK9 470 aaKnown RBP14.05□□□□□ -0.16
ATG9A-203ENST00000409033 DDX25Q9UHL0 483 aaKnown RBP14.05□□□□□ -0.16
ATG9A-203ENST00000409033 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
ATG9A-203ENST00000409033 LONP1P36776 959 aaKnown RBP14.05□□□□□ -0.16
ATG9A-203ENST00000409033 PRCPP42785 496 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 KMT5BQ4FZB7 885 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 SLF1Q9BQI6 1058 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 MYH7P12883 1935 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 IL1R1P14778 569 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 RBL2Q08999 1139 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 TDRD12Q587J7 1177 aaKnown RBP14.05□□□□□ -0.16
ATG9A-203ENST00000409033 GSDMAQ96QA5 445 aa14.05□□□□□ -0.16
ATG9A-203ENST00000409033 SORBS3O60504 671 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 FCER1AP12319 257 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 VSTM4Q8IW00 320 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 KANSL2Q9H9L4 492 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 IMPACTQ9P2X3 320 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 PUF60Q9UHX1 559 aaKnown RBP14.04□□□□□ -0.16
ATG9A-203ENST00000409033 GUCA1BQ9UMX6 200 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 PCDHA12Q9UN75 941 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 TRAPPC10P48553 1259 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 TBC1D8BQ0IIM8 1120 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 CDC37Q16543 378 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-203ENST00000409033 CRY2Q49AN0 593 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 JDP2Q8WYK2 163 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 FAM207AQ9NSI2 230 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-203ENST00000409033 PI4KBQ9UBF8 816 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 RRP9O43818 475 aaKnown RBP14.04□□□□□ -0.16
ATG9A-203ENST00000409033 CDC25BP30305 580 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 STAT3P40763 770 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 PODNQ7Z5L7 613 aa14.04□□□□□ -0.16
ATG9A-203ENST00000409033 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
ATG9A-203ENST00000409033 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
ATG9A-203ENST00000409033 B4DLN1 442 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 MYO1BO43795 1136 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 QRICH1Q2TAL8 776 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 CACNA2D4Q7Z3S7 1137 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 PRMT6Q96LA8 375 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-203ENST00000409033 CRACR2AQ9BSW2 395 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 IRX2Q9BZI1 471 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-203ENST00000409033 PALM3A6NDB9 673 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-203ENST00000409033 CCP110O43303 1012 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 ZNF569Q5MCW4 686 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 FKBP15Q5T1M5 1219 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
ATG9A-203ENST00000409033 NOC4LQ9BVI4 516 aaKnown RBP14.03□□□□□ -0.16
ATG9A-203ENST00000409033 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 PAXBP1Q9Y5B6 917 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 LTBP4Q8N2S1 1624 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 TRAF5O00463 557 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 KIF5CO60282 957 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 KRT31Q15323 416 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-203ENST00000409033 TOGARAM2Q6ZUX3 1019 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 CARD6Q9BX69 1037 aa14.03□□□□□ -0.16
ATG9A-203ENST00000409033 F5H6K3 240 aa14.02□□□□□ -0.16
ATG9A-203ENST00000409033 KLRC3Q07444 240 aa14.02□□□□□ -0.16
ATG9A-203ENST00000409033 IL17AQ16552 155 aa14.02□□□□□ -0.16
ATG9A-203ENST00000409033 PPP2R2CQ9Y2T4 447 aa14.02□□□□□ -0.16
ATG9A-203ENST00000409033 SLC37A4O43826 429 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 CCDC175P0C221 793 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 E4F1Q66K89 784 aaPredicted RBP14.02□□□□□ -0.17
ATG9A-203ENST00000409033 TRIML1Q8N9V2 468 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 ACRBPQ8NEB7 543 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.02□□□□□ -0.172e-6■■■■■ 49.8
ATG9A-203ENST00000409033 CICQ96RK0 1608 aaPredicted RBP14.02□□□□□ -0.17
ATG9A-203ENST00000409033 UTRNP46939 3433 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.171e-6■■□□□ 11.5
ATG9A-203ENST00000409033 SLC35G1Q2M3R5 365 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 ERCC6LQ2NKX8 1250 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 NIM1KQ8IY84 436 aa14.02□□□□□ -0.17
ATG9A-203ENST00000409033 DPYDQ12882 1025 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 PRAMEF18Q5VWM3 479 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 FBXO11Q86XK2 927 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 SPTLC3Q9NUV7 552 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 SLU7O95391 586 aaKnown RBP14.01□□□□□ -0.17
ATG9A-203ENST00000409033 COPB1P53618 953 aaKnown RBP14.01□□□□□ -0.17
ATG9A-203ENST00000409033 SPAG1Q07617 926 aa14.01□□□□□ -0.17
ATG9A-203ENST00000409033 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms