RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 OAZ1P54368 228 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 TMEM132BQ14DG7 1078 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 POTEEQ6S8J3 1075 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 LBX2Q6XYB7 198 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 RASGRP4Q8TDF6 673 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 CUL5Q93034 780 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 PSTPIP2Q9H939 334 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 PNMA3Q9UL41 463 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 COL11A1P12107 1806 aaPredicted RBP23.48■■□□□ 1.35
CHKB-201ENST00000406938 TESPA1A2RU30 521 aaPredicted RBP23.48■■□□□ 1.35
CHKB-201ENST00000406938 MANSC4A6NHS7 340 aaPredicted RBP23.48■■□□□ 1.35
CHKB-201ENST00000406938 OPLAHO14841 1288 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 APLP1P51693 650 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 REXO1Q8N1G1 1221 aaKnown RBP23.48■■□□□ 1.35
CHKB-201ENST00000406938 FAM43AQ8N2R8 423 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 MB21D1Q8N884 522 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 BICD2Q8TD16 824 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 PTPN18Q99952 460 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 CREBZFQ9NS37 354 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 PNMA2Q9UL42 364 aa23.48■■□□□ 1.35
CHKB-201ENST00000406938 ATP2A1O14983 1001 aa23.47■■□□□ 1.35
CHKB-201ENST00000406938 SNRNP48Q6IEG0 339 aaKnown RBP23.47■■□□□ 1.35
CHKB-201ENST00000406938 PAXIP1Q6ZW49 1069 aaPredicted RBP23.47■■□□□ 1.35
CHKB-201ENST00000406938 PCDHA6Q9UN73 950 aa23.47■■□□□ 1.35
CHKB-201ENST00000406938 MRPL11Q9Y3B7 192 aaKnown RBP23.47■■□□□ 1.35
CHKB-201ENST00000406938 PCDHA8Q9Y5H6 950 aa23.47■■□□□ 1.35
CHKB-201ENST00000406938 CYP2C8P10632 490 aa23.46■■□□□ 1.35
CHKB-201ENST00000406938 ALAS1P13196 640 aa23.46■■□□□ 1.35
CHKB-201ENST00000406938 MRPL12P52815 198 aaKnown RBP23.46■■□□□ 1.35
CHKB-201ENST00000406938 DNM1Q05193 864 aaKnown RBP23.46■■□□□ 1.35
CHKB-201ENST00000406938 UBE2SQ16763 222 aa23.46■■□□□ 1.35
CHKB-201ENST00000406938 NOM1Q5C9Z4 860 aaKnown RBP23.46■■□□□ 1.35
CHKB-201ENST00000406938 EARS2Q5JPH6 523 aaKnown RBP23.46■■□□□ 1.35
CHKB-201ENST00000406938 MYSM1Q5VVJ2 828 aa23.46■■□□□ 1.35
CHKB-201ENST00000406938 TEX13BQ9BXU2 312 aa23.46■■□□□ 1.35
CHKB-201ENST00000406938 HOMER2Q9NSB8 354 aa23.46■■□□□ 1.35
CHKB-201ENST00000406938 FAM205CA6NFA0 338 aa23.45■■□□□ 1.34
CHKB-201ENST00000406938 CLEC17AQ6ZS10 378 aa23.45■■□□□ 1.34
CHKB-201ENST00000406938 GLT8D2Q9H1C3 349 aa23.45■■□□□ 1.34
CHKB-201ENST00000406938 BTBD7Q9P203 1132 aa23.45■■□□□ 1.34
CHKB-201ENST00000406938 BIN2Q9UBW5 565 aaPredicted RBP23.45■■□□□ 1.34
CHKB-201ENST00000406938 PEX10O60683 326 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 BAG4O95429 457 aaKnown RBP23.44■■□□□ 1.34
CHKB-201ENST00000406938 GRM1Q13255 1194 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 PLS1Q14651 629 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 CYP4F22Q6NT55 531 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 PIK3AP1Q6ZUJ8 805 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 PAGR1Q9BTK6 254 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 TMEM260Q9NX78 707 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 RIPK3Q9Y572 518 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 MYH15Q9Y2K3 1946 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 MEIS2O14770 477 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 CLK2P49760 499 aaKnown RBP23.44■■□□□ 1.34
CHKB-201ENST00000406938 JAKMIP3Q5VZ66 844 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 USP17L6PQ6QN14 398 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 SMCR8Q8TEV9 937 aaPredicted RBP23.44■■□□□ 1.34
CHKB-201ENST00000406938 CLEC4DQ8WXI8 215 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 GBP4Q96PP9 640 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 SMCHD1A6NHR9 2005 aa23.44■■□□□ 1.34
CHKB-201ENST00000406938 CCDC194A0A1B0GVG4 234 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 RASSF10A6NK89 507 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 IGF2BP3O00425 579 aaKnown RBP eCLIP23.43■■□□□ 1.34
CHKB-201ENST00000406938 NFIBO00712 420 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 CNMDO75829 334 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 NCLP19338 710 aaKnown RBP23.43■■□□□ 1.34
CHKB-201ENST00000406938 STAT3P40763 770 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 MUM1L1Q5H9M0 696 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 KRT25Q7Z3Z0 450 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 TRERF1Q96PN7 1200 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 TXNRD2Q9NNW7 524 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 RNF146Q9NTX7 359 aa23.43■■□□□ 1.34
CHKB-201ENST00000406938 CFBP00751 764 aa23.42■■□□□ 1.34
CHKB-201ENST00000406938 GTF3C2Q8WUA4 911 aaPredicted RBP23.42■■□□□ 1.34
CHKB-201ENST00000406938 PARK7Q99497 189 aaKnown RBP23.42■■□□□ 1.34
CHKB-201ENST00000406938 FTOQ9C0B1 505 aaKnown RBP eCLIP23.42■■□□□ 1.34
CHKB-201ENST00000406938 RBPJLQ9UBG7 517 aa23.42■■□□□ 1.34
CHKB-201ENST00000406938 PIK3CDO00329 1044 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 HOXA13P31271 388 aaPredicted RBP23.41■■□□□ 1.34
CHKB-201ENST00000406938 KRT85P78386 507 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 SREBF2Q12772 1141 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 PGBD1Q96JS3 809 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 SPATC1LQ9H0A9 340 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 CNPY2Q9Y2B0 182 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 RABGAP1Q9Y3P9 1069 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 INHBEP58166 350 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 DEFB115Q30KQ5 88 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 TKFCQ3LXA3 575 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 RILPL1Q5EBL4 403 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 TEX2Q8IWB9 1127 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 TBC1D5Q92609 795 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 ZNF396Q96N95 335 aaPredicted RBP23.41■■□□□ 1.34
CHKB-201ENST00000406938 USP28Q96RU2 1077 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 ZIC5Q96T25 663 aa23.41■■□□□ 1.34
CHKB-201ENST00000406938 RBBP6Q7Z6E9 1792 aaKnown RBP23.4■■□□□ 1.34
CHKB-201ENST00000406938 GCOM1H8Y6P7 765 aaPredicted RBP23.4■■□□□ 1.34
CHKB-201ENST00000406938 POLR2MP0CAP2 368 aa23.4■■□□□ 1.34
CHKB-201ENST00000406938 TOB1P50616 345 aaPredicted RBP23.4■■□□□ 1.34
CHKB-201ENST00000406938 NONOQ15233 471 aaKnown RBP eCLIP23.4■■□□□ 1.34
CHKB-201ENST00000406938 MCF2L2Q86YR7 1114 aa23.4■■□□□ 1.34
CHKB-201ENST00000406938 IFNL1Q8IU54 200 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms