RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PPP4R3BQ5MIZ7 849 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 TREML2Q5T2D2 321 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 TMTC3Q6ZXV5 915 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 ANKRD13CQ8N6S4 541 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 NSUN7Q8NE18 718 aaKnown RBP9.69□□□□□ -0.86
GPC3-203ENST00000406757 GMCL1P1Q8NEA9 526 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 DCAF4Q8WV16 495 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 AIFM3Q96NN9 605 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 KIAA1683Q9H0B3 1180 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 FBXO28Q9NVF7 368 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 SLC45A1Q9Y2W3 748 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
GPC3-203ENST00000406757 LAMA3Q16787 3333 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 CYTH3O43739 400 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 DHX16O60231 1041 aaKnown RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 SGPL1O95470 568 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 TFRCP02786 760 aaKnown RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 FDPSP14324 419 aaKnown RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 TAL1P17542 331 aaPredicted RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 VCAM1P19320 739 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 GJB2P29033 226 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 KIF5BP33176 963 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 SSRP1Q08945 709 aaKnown RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 FUT2Q10981 343 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 PDAP1Q13442 181 aaKnown RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 DEFB118Q96PH6 123 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 TANGO6Q9C0B7 1094 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 RPAP3Q9H6T3 665 aaPredicted RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 SH2D4AQ9H788 454 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 GJB4Q9NTQ9 266 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 RBM28Q9NW13 759 aaKnown RBP9.68□□□□□ -0.86
GPC3-203ENST00000406757 TMOD4Q9NZQ9 345 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 AGTPBP1Q9UPW5 1226 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 SMC3Q9UQE7 1217 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 MGAMO43451 1857 aa9.68□□□□□ -0.86
GPC3-203ENST00000406757 C19orf81C9J6K1 198 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 PEX10O60683 326 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 USP14P54578 494 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 IRF5Q13568 498 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 ASPRV1Q53RT3 343 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
GPC3-203ENST00000406757 ADGRF4Q8IZF3 695 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 IL27Q8NEV9 243 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 SMARCC2Q8TAQ2 1214 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 PXYLP1Q8TE99 480 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 FOXD4L4Q8WXT5 416 aaPredicted RBP9.67□□□□□ -0.86
GPC3-203ENST00000406757 KIFC2Q96AC6 838 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 GMCL1Q96IK5 515 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 PIGSQ96S52 555 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 MAP3K14Q99558 947 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 ORC3Q9UBD5 711 aaPredicted RBP9.67□□□□□ -0.86
GPC3-203ENST00000406757 NR2E3Q9Y5X4 410 aa9.67□□□□□ -0.86
GPC3-203ENST00000406757 NID2Q14112 1375 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 CNTNAP5Q8WYK1 1306 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 BAZ2BQ9UIF8 2168 aaKnown RBP9.66□□□□□ -0.86
GPC3-203ENST00000406757 CCDC196A0A1B0GTZ2 297 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 EVI5O60447 810 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 IFNAR1P17181 557 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 GNAQP50148 359 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 RCAN1P53805 252 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 GUCY1B3Q02153 619 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 SH3D19Q5HYK7 790 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 SYDE2Q5VT97 1194 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 CCDC174Q6PII3 467 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 CPLX2Q6PUV4 134 aaKnown RBP9.66□□□□□ -0.86
GPC3-203ENST00000406757 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
GPC3-203ENST00000406757 COA7Q96BR5 231 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 PRO3102Q9H379 93 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 JMJD4Q9H9V9 463 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 PAK6Q9NQU5 681 aaPredicted RBP9.66□□□□□ -0.86
GPC3-203ENST00000406757 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 PRR12Q9ULL5 1215 aa9.66□□□□□ -0.86
GPC3-203ENST00000406757 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.66□□□□□ -0.86
GPC3-203ENST00000406757 PTPRFP10586 1907 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 WDR46O15213 610 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 PRPF3O43395 683 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 FLOT1O75955 427 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 CDKL5O76039 1030 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 AKAP17AQ02040 695 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 PKN1Q16512 942 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 FAM110CQ1W6H9 321 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 GPATCH4Q5T3I0 446 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 CATSPERGQ6ZRH7 1159 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 FAM184AQ8NB25 1140 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 PROCA1Q8NCQ7 364 aaPredicted RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 LPAR1Q92633 364 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 ATG4CQ96DT6 458 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 INTS4Q96HW7 963 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 PAWRQ96IZ0 340 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 C12orf42Q96LP6 360 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 LZTS2Q9BRK4 669 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 LLPHQ9BRT6 129 aaKnown RBP9.65□□□□□ -0.86
GPC3-203ENST00000406757 ALG1Q9BT22 464 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms