RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 BLZF1Q9H2G9 400 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 PSTPIP2Q9H939 334 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 JAG1P78504 1218 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 QRICH1Q2TAL8 776 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 TMC6Q7Z403 805 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 GMCL1Q96IK5 515 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 GLT8D2Q9H1C3 349 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 NFE2L3Q9Y4A8 694 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 TNNI2P48788 182 aa27.87■■■□□ 2.05
DNMT3A-206ENST00000406659 CUL4BQ13620 913 aa27.87■■■□□ 2.05
DNMT3A-206ENST00000406659 RRP1BQ14684 758 aaKnown RBP27.87■■■□□ 2.05
DNMT3A-206ENST00000406659 UBE2SQ16763 222 aa27.87■■■□□ 2.05
DNMT3A-206ENST00000406659 VEZTQ9HBM0 779 aa27.87■■■□□ 2.05
DNMT3A-206ENST00000406659 NDUFB10O96000 172 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CABP7Q86V35 215 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CCDC125Q86Z20 511 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 TRMT44Q8IYL2 757 aaKnown RBP27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 MTMR14Q8NCE2 650 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 MTRQ99707 1265 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 RMND1Q9NWS8 449 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CDK11BP21127 795 aaKnown RBP27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CLK2P49760 499 aaKnown RBP27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CXCL9Q07325 125 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CDC37Q16543 378 aaPredicted RBP27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 CALCRLQ16602 461 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 FKBP1CQ5VVH2 108 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 POTEDQ86YR6 584 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 PCDHA1Q9Y5I3 950 aa27.86■■■□□ 2.05
DNMT3A-206ENST00000406659 IKQ13123 557 aaPredicted RBP27.85■■■□□ 2.05
DNMT3A-206ENST00000406659 DNTTIP2Q5QJE6 756 aaKnown RBP27.85■■■□□ 2.05
DNMT3A-206ENST00000406659 CNTNAP1P78357 1384 aa27.85■■■□□ 2.05
DNMT3A-206ENST00000406659 TECP42680 631 aa27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 DHX8Q14562 1220 aaKnown RBP27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 ARID5BQ14865 1188 aa27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 CIAPIN1Q6FI81 312 aa27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 KLHL10Q6JEL2 608 aa27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 NUP88Q99567 741 aaPredicted RBP27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 SYNPO2Q9UMS6 1093 aa27.84■■■□□ 2.05
DNMT3A-206ENST00000406659 RPN1P04843 607 aaKnown RBP27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 BMP3P12645 472 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 CD44P16070 742 aaKnown RBP27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 NAALADL2Q58DX5 795 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 JDP2Q8WYK2 163 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 MTMR9Q96QG7 549 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 PLIN2Q99541 437 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 MTFR1LQ9H019 292 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 TAOK3Q9H2K8 898 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 CUEDC2Q9H467 287 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 ARHGEF10LQ9HCE6 1279 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 PPP1R3GB7ZBB8 358 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 TXKP42681 527 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 SYDE2Q5VT97 1194 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 SPATA1Q5VX52 437 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 DPF2Q92785 391 aa27.83■■■□□ 2.05
DNMT3A-206ENST00000406659 ARFGEF1Q9Y6D6 1849 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 TMEM232C9JQI7 657 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 TDP2O95551 362 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 ZNF18P17022 549 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 TMEM266Q2M3C6 531 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 MED15Q96RN5 788 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 MAGEF1Q9HAY2 307 aa27.82■■■□□ 2.04
DNMT3A-206ENST00000406659 SYNRGQ9UMZ2 1314 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 MYL1P05976 194 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 HSP90AA4PQ58FG1 418 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 PPP4R3AQ6IN85 833 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 FAM83AQ86UY5 434 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 SMYD4Q8IYR2 804 aaPredicted RBP27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 CCDC150Q8NCX0 1101 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 PPP1R1BQ9UD71 204 aaPredicted RBP27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 SLC37A4O43826 429 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 EDIL3O43854 480 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 PLCG1P19174 1290 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 IGSF22Q8N9C0 903 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 NAP1L4Q99733 375 aaKnown RBP27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 AMNQ9BXJ7 453 aa27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 R3HCC1Q9Y3T6 440 aaKnown RBP27.81■■■□□ 2.04
DNMT3A-206ENST00000406659 A0A1W2PRG0 241 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 FXR2P51116 673 aaKnown RBP eCLIP27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 STX17P56962 302 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 TNIP1Q15025 636 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 ZNF658Q5TYW1 1059 aaPredicted RBP27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 FBXO11Q86XK2 927 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 CALML4Q96GE6 196 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 RAB34Q9BZG1 259 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 TMEM39BQ9GZU3 492 aa27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 SAMSN1Q9NSI8 373 aaKnown RBP27.8■■■□□ 2.04
DNMT3A-206ENST00000406659 SKILP12757 684 aa27.79■■■□□ 2.04
DNMT3A-206ENST00000406659 BTNL9Q6UXG8 535 aa27.79■■■□□ 2.04
DNMT3A-206ENST00000406659 ZBED3Q96IU2 234 aaPredicted RBP27.79■■■□□ 2.04
DNMT3A-206ENST00000406659 KBTBD4Q9NVX7 518 aa27.79■■■□□ 2.04
DNMT3A-206ENST00000406659 LRWD1Q9UFC0 647 aa27.79■■■□□ 2.04
DNMT3A-206ENST00000406659 TBC1D12O60347 775 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 GCFC2P16383 781 aaKnown RBP27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 SNAP25P60880 206 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 GOPCQ9HD26 462 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 DDX25Q9UHL0 483 aaKnown RBP27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 ZBTB21Q9ULJ3 1066 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 CTNND2Q9UQB3 1225 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L15C9J2P7 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L13C9JLJ4 530 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms