RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 TMEM60Q9H2L4 133 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 GINM1Q9NU53 330 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 ZBTB21Q9ULJ3 1066 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 TMX2Q9Y320 296 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 PRR29P0C7W0 189 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 ISM2Q6H9L7 571 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
PARVB-204ENST00000406477 RMND1Q9NWS8 449 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
PARVB-204ENST00000406477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
PARVB-204ENST00000406477 PPP1R11O60927 126 aaPredicted RBP18.33■□□□□ 0.52
PARVB-204ENST00000406477 ERCC5P28715 1186 aaPredicted RBP18.33■□□□□ 0.52
PARVB-204ENST00000406477 STAT6P42226 847 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 DPYDQ12882 1025 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 IKQ13123 557 aaPredicted RBP18.33■□□□□ 0.52
PARVB-204ENST00000406477 NCAPHQ15003 741 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 TMEM266Q2M3C6 531 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 RRAGBQ5VZM2 374 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 PPP4R3AQ6IN85 833 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 SPC24Q8NBT2 197 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 DISC1Q9NRI5 854 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
PARVB-204ENST00000406477 TMEM232C9JQI7 657 aa18.32■□□□□ 0.52
PARVB-204ENST00000406477 CBFA2T2O43439 604 aa18.32■□□□□ 0.52
PARVB-204ENST00000406477 AFMP43652 599 aa18.32■□□□□ 0.52
PARVB-204ENST00000406477 AP3B2Q13367 1082 aa18.32■□□□□ 0.52
PARVB-204ENST00000406477 RRP1BQ14684 758 aaKnown RBP18.32■□□□□ 0.52
PARVB-204ENST00000406477 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
PARVB-204ENST00000406477 PDXDC2PQ6P474 469 aa18.32■□□□□ 0.52
PARVB-204ENST00000406477 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
PARVB-204ENST00000406477 ENOX1Q8TC92 643 aaKnown RBP18.32■□□□□ 0.52
PARVB-204ENST00000406477 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.32■□□□□ 0.52
PARVB-204ENST00000406477 ARFGEF1Q9Y6D6 1849 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 PLA2G6O60733 806 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 ASNSP08243 561 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 CAP2P40123 477 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 CALCRLQ16602 461 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 GTPBP4Q9BZE4 634 aaKnown RBP18.31■□□□□ 0.52
PARVB-204ENST00000406477 TMEM39BQ9GZU3 492 aa18.31■□□□□ 0.52
PARVB-204ENST00000406477 FZD9O00144 591 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 FOSP01100 380 aaPredicted RBP18.3■□□□□ 0.52
PARVB-204ENST00000406477 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
PARVB-204ENST00000406477 JAG1P78504 1218 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 CABP7Q86V35 215 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 PGAP2Q9UHJ9 254 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 USP11P51784 963 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 STAT2P52630 851 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 PDIA5Q14554 519 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 MOXD1Q6UVY6 613 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 CALML4Q96GE6 196 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 MTMR9Q96QG7 549 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 IMPACTQ9P2X3 320 aa18.3■□□□□ 0.52
PARVB-204ENST00000406477 SLC26A4O43511 780 aa18.29■□□□□ 0.52
PARVB-204ENST00000406477 BMP6P22004 513 aa18.29■□□□□ 0.52
PARVB-204ENST00000406477 RASA3Q14644 834 aa18.29■□□□□ 0.52
PARVB-204ENST00000406477 KARSQ15046 597 aaKnown RBP18.29■□□□□ 0.52
PARVB-204ENST00000406477 UBE2SQ16763 222 aa18.29■□□□□ 0.52
PARVB-204ENST00000406477 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
PARVB-204ENST00000406477 HOOK2Q96ED9 719 aa18.29■□□□□ 0.52
PARVB-204ENST00000406477 VCPKMTQ9H867 229 aa18.29■□□□□ 0.52
PARVB-204ENST00000406477 PTGER2P43116 358 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 GSDMDP57764 484 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 FANCCQ00597 558 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 AMPD3Q01432 767 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 IGSF22Q8N9C0 903 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
PARVB-204ENST00000406477 GMPSP49915 693 aaPredicted RBP18.27■□□□□ 0.52
PARVB-204ENST00000406477 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
PARVB-204ENST00000406477 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
PARVB-204ENST00000406477 TTC12Q9H892 705 aaPredicted RBP18.27■□□□□ 0.52
PARVB-204ENST00000406477 DDX25Q9UHL0 483 aaKnown RBP18.27■□□□□ 0.52
PARVB-204ENST00000406477 MARCH6O60337 910 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
PARVB-204ENST00000406477 TECP42680 631 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 TXKP42681 527 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 KCNB1Q14721 858 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 MIGA2Q7L4E1 593 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 ANO3Q9BYT9 981 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 KBTBD4Q9NVX7 518 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 IFNKQ9P0W0 207 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 STK17AQ9UEE5 414 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 LRWD1Q9UFC0 647 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 CNOT7Q9UIV1 285 aaKnown RBP18.26■□□□□ 0.51
PARVB-204ENST00000406477 FEM1BQ9UK73 627 aa18.26■□□□□ 0.51
PARVB-204ENST00000406477 CYP3A7-CYP3A51PA0A087WV96 503 aa18.25■□□□□ 0.51
PARVB-204ENST00000406477 H7C1D1 291 aa18.25■□□□□ 0.51
PARVB-204ENST00000406477 TDP2O95551 362 aa18.25■□□□□ 0.51
PARVB-204ENST00000406477 SERPINC1P01008 464 aa18.25■□□□□ 0.51
PARVB-204ENST00000406477 RPN1P04843 607 aaKnown RBP18.25■□□□□ 0.51
PARVB-204ENST00000406477 PTGS1P23219 599 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms