RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 SNAPC2Q13487 334 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 PKP1Q13835 747 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 KMT5BQ4FZB7 885 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 DGKHQ86XP1 1220 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 VPS54Q9P1Q0 977 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 EXOC3O60645 756 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-204ENST00000405493 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 KRT5P13647 590 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 IFT81Q8WYA0 676 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 ABCC12Q96J65 1359 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 FAM102BQ5T8I3 360 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 GPR101Q96P66 508 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 NACC1Q96RE7 527 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L15C9J2P7 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L13C9JLJ4 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L11C9JVI0 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L18D6R9N7 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L22D6RA61 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L17D6RBQ6 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L19D6RCP7 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L20D6RJB6 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZNF202O95125 648 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 TNNC2P02585 160 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 USP17L24Q0WX57 530 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 ME3Q16798 604 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 MRPL44Q9H9J2 332 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 IMPACTQ9P2X3 320 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 LAD1O00515 517 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 PLSCR1O15162 318 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 RGL2O15211 777 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 LIG4P49917 911 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 PTH1RQ03431 593 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 DMTNQ08495 405 aa12.99□□□□□ -0.33
RAPGEF3-204ENST00000405493 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 NLRP12P59046 1061 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 PLCB3Q01970 1234 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 IGKV5-2P06315 115 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 FANCCQ00597 558 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 ENTPD3O75355 529 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 CYP2E1P05181 493 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 PAK1Q13153 545 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 MTX1Q13505 466 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 OR52Z1P0C646 297 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 SLIT1O75093 1534 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 SELENOSQ9BQE4 189 aa12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 IQCGQ9H095 443 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-204ENST00000405493 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 GCNT3O95395 438 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 KRT19P08727 400 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 HUNKP57058 714 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 C9orf131Q5VYM1 1079 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 CSGALNACT2Q8N6G5 542 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 COL4A3BPQ9Y5P4 624 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 ASB14A6NK59 587 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 CETPP11597 493 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 FCER1AP12319 257 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 KCTD1Q719H9 257 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 MIS12Q9H081 205 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 GAS8O95995 478 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 PSAPP07602 524 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 IGBP1P78318 339 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 POSTNQ15063 836 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 DYMQ7RTS9 669 aa12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-204ENST00000405493 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 TLR3O15455 904 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 GNA14O95837 355 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 STXBP2Q15833 593 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 CCDC77Q9BR77 488 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms