RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
NUCB1-201ENST00000405315 TFR2Q9UP52 801 aa16.4■□□□□ 0.22
NUCB1-201ENST00000405315 NUTM2BA6NNL0 878 aaPredicted RBP16.39■□□□□ 0.21
NUCB1-201ENST00000405315 NUTM2EB1AL46 878 aaPredicted RBP16.39■□□□□ 0.21
NUCB1-201ENST00000405315 PSMD14O00487 310 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 ENC1O14682 589 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 NAPAP54920 295 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 HNRNPH2P55795 449 aaKnown RBP16.39■□□□□ 0.21
NUCB1-201ENST00000405315 SEMA3FQ13275 785 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 CCDC122Q5T0U0 273 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 TRAPPC11Q7Z392 1133 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 CCDC47Q96A33 483 aaKnown RBP16.39■□□□□ 0.21
NUCB1-201ENST00000405315 EEF2KMTQ96G04 330 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 GBP3Q9H0R5 595 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 L1RE1Q9UN81 338 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 ZPR1O75312 459 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 EIF3JO75822 258 aaKnown RBP16.39■□□□□ 0.21
NUCB1-201ENST00000405315 TRIM21P19474 475 aaKnown RBP16.39■□□□□ 0.21
NUCB1-201ENST00000405315 ASIC1P78348 528 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 PDE4DQ08499 809 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 GRIK5Q16478 980 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 LETM2Q2VYF4 491 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 P2RX5Q93086 422 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 HDAC6Q9UBN7 1215 aa16.39■□□□□ 0.21
NUCB1-201ENST00000405315 CCNT1O60563 726 aaKnown RBP16.38■□□□□ 0.21
NUCB1-201ENST00000405315 BAG3O95817 575 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 RASA1P20936 1047 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 KLK7P49862 253 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 GSTO1P78417 241 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 MEA1Q16626 185 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 KRT25Q7Z3Z0 450 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 ZBTB9Q96C00 473 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 CNOT6LQ96LI5 555 aaKnown RBP16.38■□□□□ 0.21
NUCB1-201ENST00000405315 AK8Q96MA6 479 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 TRIM9Q9C026 710 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 AGPAT5Q9NUQ2 364 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 BICDL2A1A5D9 508 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 CCNE1P24864 410 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 TM4SF1P30408 202 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 KRT83P78385 493 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
NUCB1-201ENST00000405315 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 ZMYND12Q9H0C1 365 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 ADAM21Q9UKJ8 722 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 SNED1Q8TER0 1413 aa16.38■□□□□ 0.21
NUCB1-201ENST00000405315 DDX60LQ5H9U9 1706 aaKnown RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 GNPATO15228 680 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 ATP1A1P05023 1023 aaKnown RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 MTIF2P46199 727 aaKnown RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 ANKRD40Q6AI12 368 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 SPZ1Q9BXG8 430 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 ZNHIT6Q9NWK9 470 aaKnown RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 TUBBP07437 444 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 TBC1D8BQ0IIM8 1120 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 EXOC4Q96A65 974 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 NUP58Q9BVL2 599 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
NUCB1-201ENST00000405315 VPS18Q9P253 973 aa16.37■□□□□ 0.21
NUCB1-201ENST00000405315 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 FCER1AP12319 257 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 STK4Q13043 487 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 CASP8Q14790 479 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 KRT86O43790 486 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 LMAN1P49257 510 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 PTF1AQ7RTS3 328 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 MSL3Q8N5Y2 521 aaKnown RBP16.36■□□□□ 0.21
NUCB1-201ENST00000405315 RETREG2Q8NC44 543 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 C7orf25Q9BPX7 421 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
NUCB1-201ENST00000405315 C6orf50Q9HD87 102 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 SAR1BQ9Y6B6 198 aa16.36■□□□□ 0.21
NUCB1-201ENST00000405315 ZBTB22O15209 634 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
NUCB1-201ENST00000405315 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
NUCB1-201ENST00000405315 TECP42680 631 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 PPP4CP60510 307 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 ZBED6P86452 979 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 FAM98CQ17RN3 349 aaKnown RBP16.35■□□□□ 0.21
NUCB1-201ENST00000405315 WDR93Q6P2C0 686 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 NEK8Q86SG6 692 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
NUCB1-201ENST00000405315 EYA3Q99504 573 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 NOC4LQ9BVI4 516 aaKnown RBP16.35■□□□□ 0.21
NUCB1-201ENST00000405315 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 ZNF662Q6ZS27 426 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms