RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 C6orf50Q9HD87 102 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 MLH3Q9UHC1 1453 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 ROBO2Q9HCK4 1378 aa8.15□□□□□ -1.1
HDAC9-202ENST00000405010 KCNA6P17658 529 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 ADD2P35612 726 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 LONP1P36776 959 aaKnown RBP8.15□□□□□ -1.11
HDAC9-202ENST00000405010 PRCPP42785 496 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 ERVK-24P63145 666 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 BIRC2Q13490 618 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 PTPAQ15257 358 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 KRT26Q7Z3Y9 468 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 TEX11Q8IYF3 940 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 OXER1Q8TDS5 423 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 SMCR8Q8TEV9 937 aaPredicted RBP8.15□□□□□ -1.11
HDAC9-202ENST00000405010 HVCN1Q96D96 273 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.11
HDAC9-202ENST00000405010 TCEAL9Q9UHQ7 104 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 TFR2Q9UP52 801 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 DEPDC5O75140 1603 aa8.15□□□□□ -1.11
HDAC9-202ENST00000405010 LUC7L3O95232 432 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ALDH3A1P30838 453 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 MDH1P40925 334 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 MXRA7P84157 204 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ZBTB16Q05516 673 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 GRIN1Q05586 938 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 PUM3Q15397 648 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 TRAPPC11Q7Z392 1133 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 FOXP4Q8IVH2 680 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 PPFIBP2Q8ND30 876 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SPDL1Q96EA4 605 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SAAL1Q96ER3 474 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SLC39A2Q9NP94 309 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 HOMER3Q9NSC5 361 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CD163L1Q9NR16 1453 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 NPHP4O75161 1426 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ALKQ9UM73 1620 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 WDR19Q8NEZ3 1342 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 STK36Q9NRP7 1315 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CCDC169A6NNP5 214 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 G3V3G9 751 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 NCK2O43639 380 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 FLOT1O75955 427 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CIAO1O76071 339 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ZNF18P17022 549 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 TXKP42681 527 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 POLR2FP61218 127 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 DCAF17Q5H9S7 520 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 DCAF8Q5TAQ9 597 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 NAA35Q5VZE5 725 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SAMD1Q6SPF0 538 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ANKRD42Q8N9B4 389 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SPATA5Q8NB90 893 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 LSM14BQ9BX40 385 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 TEX13AQ9BXU3 409 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 EHD4Q9H223 541 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 NOP53Q9NZM5 478 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ATP8A1Q9Y2Q0 1164 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CD2APQ9Y5K6 639 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 NRKQ7Z2Y5 1582 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CPS1P31327 1500 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 BACH1O14867 736 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CCNE1P24864 410 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 GNA11P29992 359 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SATB1Q01826 763 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 DRP2Q13474 957 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 RNF10Q8N5U6 811 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ARL8AQ96BM9 186 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ZIM3Q96PE6 472 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 PLVAPQ9BX97 442 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 VCXQ9H320 206 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 HPS5Q9UPZ3 1129 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 MPHOSPH10O00566 681 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CCNT1O60563 726 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SCG2P13521 617 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 BRD2P25440 801 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 ATP5DP30049 168 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CETN2P41208 172 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 C6orf163Q5TEZ5 329 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 BLIDQ8IZY5 108 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 THOC1Q96FV9 657 aaKnown RBP8.14□□□□□ -1.11
HDAC9-202ENST00000405010 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 INTS13Q9NVM9 706 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 CAPN11Q9UMQ6 739 aa8.14□□□□□ -1.11
HDAC9-202ENST00000405010 PALLDQ8WX93 1383 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 LRRD1A4D1F6 860 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 SMIM24O75264 130 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 TSPY3P0CV98 308 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 TSPY8P0CW00 308 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 PHKA1P46020 1223 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 AARSP49588 968 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 ANTXR2P58335 489 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 ADAT2Q7Z6V5 191 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 MSL3Q8N5Y2 521 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms