RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 NCAPG2Q86XI2 1143 aa38.39■■■■□ 3.74
CSNK1E-204ENST00000403904 TRERF1Q96PN7 1200 aa38.39■■■■□ 3.74
CSNK1E-204ENST00000403904 PORCNQ9H237 461 aa38.39■■■■□ 3.74
CSNK1E-204ENST00000403904 WBP1LQ9NX94 342 aa38.39■■■■□ 3.74
CSNK1E-204ENST00000403904 VPS54Q9P1Q0 977 aa38.39■■■■□ 3.74
CSNK1E-204ENST00000403904 CCNA1P78396 465 aa38.38■■■■□ 3.73
CSNK1E-204ENST00000403904 ABCB11O95342 1321 aa38.37■■■■□ 3.73
CSNK1E-204ENST00000403904 ERCC3P19447 782 aa38.37■■■■□ 3.73
CSNK1E-204ENST00000403904 TRAF1Q13077 416 aa38.37■■■■□ 3.73
CSNK1E-204ENST00000403904 RNF146Q9NTX7 359 aa38.37■■■■□ 3.73
CSNK1E-204ENST00000403904 hCG_1984214I3L0E3 225 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 SLC25A27O95847 323 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 NAPAP54920 295 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 MUM1L1Q5H9M0 696 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 ZNF713Q8N859 430 aaPredicted RBP38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 SHISA4Q96DD7 197 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 EFCC1Q9HA90 598 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 GJB4Q9NTQ9 266 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 FOSBP53539 338 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 TKFCQ3LXA3 575 aa38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 MRPL11Q9Y3B7 192 aaKnown RBP38.36■■■■□ 3.73
CSNK1E-204ENST00000403904 ECM2O94769 699 aaPredicted RBP38.35■■■■□ 3.73
CSNK1E-204ENST00000403904 TSKSQ9UJT2 592 aa38.35■■■■□ 3.73
CSNK1E-204ENST00000403904 WDR78Q5VTH9 848 aa38.34■■■■□ 3.73
CSNK1E-204ENST00000403904 CCAR1Q8IX12 1150 aaKnown RBP38.34■■■■□ 3.73
CSNK1E-204ENST00000403904 CLEC4DQ8WXI8 215 aa38.34■■■■□ 3.73
CSNK1E-204ENST00000403904 NFIBO00712 420 aa38.33■■■■□ 3.73
CSNK1E-204ENST00000403904 JMYQ8N9B5 988 aa38.33■■■■□ 3.73
CSNK1E-204ENST00000403904 SHCBP1Q8NEM2 672 aa38.33■■■■□ 3.73
CSNK1E-204ENST00000403904 CHST13Q8NET6 341 aa38.32■■■■□ 3.73
CSNK1E-204ENST00000403904 MROH8Q9H579 483 aa38.32■■■■□ 3.73
CSNK1E-204ENST00000403904 ACAD9Q9H845 621 aa38.32■■■■□ 3.73
CSNK1E-204ENST00000403904 SH3GLB2Q9NR46 395 aa38.32■■■■□ 3.73
CSNK1E-204ENST00000403904 KIF3AQ9Y496 699 aa38.32■■■■□ 3.73
CSNK1E-204ENST00000403904 OPLAHO14841 1288 aa38.31■■■■□ 3.72
CSNK1E-204ENST00000403904 COPB2P35606 906 aa38.31■■■■□ 3.72
CSNK1E-204ENST00000403904 PPP1R18Q6NYC8 613 aa38.31■■■■□ 3.72
CSNK1E-204ENST00000403904 CCDC12Q8WUD4 166 aaPredicted RBP38.31■■■■□ 3.72
CSNK1E-204ENST00000403904 GPR25O00155 361 aa38.3■■■■□ 3.72
CSNK1E-204ENST00000403904 XBP1P17861 261 aa38.3■■■■□ 3.72
CSNK1E-204ENST00000403904 SP3Q02447 781 aa38.3■■■■□ 3.72
CSNK1E-204ENST00000403904 C8orf76Q96K31 380 aa38.3■■■■□ 3.72
CSNK1E-204ENST00000403904 FBXO40Q9UH90 709 aa38.3■■■■□ 3.72
CSNK1E-204ENST00000403904 KCNJ14Q9UNX9 436 aa38.3■■■■□ 3.72
CSNK1E-204ENST00000403904 SMCO2A6NFE2 343 aa38.29■■■■□ 3.72
CSNK1E-204ENST00000403904 CCDC148Q8NFR7 591 aa38.29■■■■□ 3.72
CSNK1E-204ENST00000403904 TBC1D5Q92609 795 aa38.29■■■■□ 3.72
CSNK1E-204ENST00000403904 DAXXQ9UER7 740 aaPredicted RBP38.29■■■■□ 3.72
CSNK1E-204ENST00000403904 MAPK4P31152 587 aa38.28■■■■□ 3.72
CSNK1E-204ENST00000403904 PSTPIP2Q9H939 334 aa38.28■■■■□ 3.72
CSNK1E-204ENST00000403904 CWC22Q9HCG8 908 aaKnown RBP38.28■■■■□ 3.72
CSNK1E-204ENST00000403904 NLRP5P59047 1200 aa38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 GUCY1B3Q02153 619 aa38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 NSMFQ6X4W1 530 aa38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 ZMYND12Q9H0C1 365 aa38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 CFBP00751 764 aa38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 LACTBP83111 547 aaPredicted RBP38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 TRIM29Q14134 588 aa38.27■■■■□ 3.72
CSNK1E-204ENST00000403904 MGAMO43451 1857 aa38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 LARP1BQ659C4 914 aaKnown RBP38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 KRT40Q6A162 431 aa38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 GPR142Q7Z601 462 aa38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 MCF2L2Q86YR7 1114 aa38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 PHF20Q9BVI0 1012 aa38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 A1CFQ9NQ94 594 aaKnown RBP38.26■■■■□ 3.72
CSNK1E-204ENST00000403904 RBBP6Q7Z6E9 1792 aaKnown RBP38.26■■■■□ 3.71
CSNK1E-204ENST00000403904 ZSWIM8A7E2V4 1837 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 PLXNB2O15031 1838 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 CTGFP29279 349 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 ADCY7P51828 1080 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 ANKRD35Q8N283 1001 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 ARHGAP39Q9C0H5 1083 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 C6orf50Q9HD87 102 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 DOCK3Q8IZD9 2030 aa38.25■■■■□ 3.71
CSNK1E-204ENST00000403904 ESYT2A0FGR8 921 aa38.24■■■■□ 3.71
CSNK1E-204ENST00000403904 PLEKHH3Q7Z736 793 aa38.24■■■■□ 3.71
CSNK1E-204ENST00000403904 FBXO18Q8NFZ0 1043 aa38.24■■■■□ 3.71
CSNK1E-204ENST00000403904 CUL5Q93034 780 aa38.24■■■■□ 3.71
CSNK1E-204ENST00000403904 RIC8AQ9NPQ8 531 aa38.24■■■■□ 3.71
CSNK1E-204ENST00000403904 ZNFX1Q9P2E3 1918 aaKnown RBP38.24■■■■□ 3.71
CSNK1E-204ENST00000403904 ADAMTS3O15072 1205 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 USP17L6PQ6QN14 398 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 RNF207Q6ZRF8 634 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 MMP19Q99542 508 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 IVNS1ABPQ9Y6Y0 642 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 FCER1AP12319 257 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 HOXA13P31271 388 aaPredicted RBP38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 PSMC4P43686 418 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 NOM1Q5C9Z4 860 aaKnown RBP38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 FAM177A1Q8N128 213 aaPredicted RBP38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 RGS22Q8NE09 1264 aa38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 ZNF296Q8WUU4 475 aaPredicted RBP38.23■■■■□ 3.71
CSNK1E-204ENST00000403904 MEIS2O14770 477 aa38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 GNA11P29992 359 aa38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 MRPL12P52815 198 aaKnown RBP38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 RPS6P62753 249 aaKnown RBP38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 BAATQ14032 418 aaPredicted RBP38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 KCTD2Q14681 263 aa38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 NPY5RQ15761 445 aa38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 UBE2SQ16763 222 aa38.22■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms