RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CDADC1Q9BWV3 514 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 MRPL4Q9BYD3 311 aaKnown RBP5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 DUSP13Q9UII6 198 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 TCFL5Q9UL49 500 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 PLAAQ9Y263 795 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 PRKAB1Q9Y478 270 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 PCDHA9Q9Y5H5 950 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 TNPO3Q9Y5L0 923 aaKnown RBP5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 BACE2Q9Y5Z0 518 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 CCDC163A0A0D9SF12 145 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 FAM83GA6ND36 823 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 ZNF205O95201 554 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 TGFB1P01137 390 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 SCG5P05408 212 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 BMP8BP34820 402 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 IGBP1P78318 339 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 GAB4Q2WGN9 574 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 MBLAC2Q68D91 279 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 CPNE8Q86YQ8 564 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 JAMLQ86YT9 394 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 ENOX1Q8TC92 643 aaKnown RBP5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 METTL22Q9BUU2 404 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 PHF20Q9BVI0 1012 aa5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 TRIT1Q9H3H1 467 aaKnown RBP5.52□□□□□ -1.53
HMGB1P17-201ENST00000403495 PITPNM2Q9BZ72 1349 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 DNAJC25-GNG10A0A024R161 153 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 SSU72P8A0A1W2PR75 194 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 TMEM82A0PJX8 343 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 DYRK3O43781 588 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 RFPL3O75679 317 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 CRTAMO95727 393 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 ESR1P03372 595 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 IBSPP21815 317 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 SEPHS1P49903 392 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 PCBP3P57721 371 aaKnown RBP5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 EGR3Q06889 387 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 BNIP3Q12983 259 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 INF2Q27J81 1249 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 TRIM61Q5EBN2 209 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 TAF7LQ5H9L4 462 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 LRRTM3Q86VH5 581 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 RPUSD2Q8IZ73 545 aaKnown RBP5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 GSTCDQ8NEC7 633 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 NETO1Q8TDF5 533 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 PIM2Q9P1W9 311 aa5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 NOP58Q9Y2X3 529 aaKnown RBP5.51□□□□□ -1.53
HMGB1P17-201ENST00000403495 GSG1L2A8MUP6 293 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 MEFVO15553 781 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 OPA1O60313 960 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 KPNA6O60684 536 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 CPP00450 1065 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 FURINP09958 794 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 H2AFB1P0C5Y9 115 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 H2AFB2P0C5Z0 115 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 POU3F3P20264 500 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 RPL10P27635 214 aaKnown RBP5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 CLCN7P51798 805 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 ANAPC15P60006 121 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 GABREP78334 506 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 LAPTM5Q13571 262 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 PCBP1Q15365 356 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 IFI16Q16666 785 aaKnown RBP5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 WAPLQ7Z5K2 1190 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 STRA8Q7Z7C7 330 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 RNF180Q86T96 592 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 KSR1Q8IVT5 923 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 LINC00116Q8NCU8 138 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 PTPRN2Q92932 1015 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 PPARGC1AQ9UBK2 798 aaKnown RBP5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 FBXL7Q9UJT9 491 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 PCDHA8Q9Y5H6 950 aa5.5□□□□□ -1.53
HMGB1P17-201ENST00000403495 FGF10O15520 208 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 VIL1P09327 827 aaKnown RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 HMGB1P09429 215 aaKnown RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 SRGAP2CP0DJJ0 459 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 FOSL1P15407 271 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 STAT3P40763 770 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 NOP2P46087 812 aaKnown RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 CDKN1CP49918 316 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 NEK4P51957 841 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 TEKQ02763 1124 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 AOC3Q16853 763 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 SKOR2Q2VWA4 1001 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 STYK1Q6J9G0 422 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 ABHD17CQ6PCB6 329 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 ZNF574Q6ZN55 896 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 MTDHQ86UE4 582 aaKnown RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 ZCRB1Q8TBF4 217 aaKnown RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 CHAC2Q8WUX2 184 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 LEO1Q8WVC0 666 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 MKNK2Q9HBH9 465 aa5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 MAGEC2Q9UBF1 373 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P17-201ENST00000403495 TMEM265A0A087WTH1 108 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 NPHP3-ACAD11A0A0J9YXS1 232 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 TCRBV16S1A1N1A0A5B0 115 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 MSTNO14793 375 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 GSC2O15499 205 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 RAB11FIP3O75154 756 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 JMJD7P0C870 316 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms