RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CCDC129Q6ZRS4 1044 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 ZNF365Q70YC5 407 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 TLK2Q86UE8 772 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 PURBQ96QR8 312 aaKnown RBP14.17□□□□□ -0.14
LINC00544-201ENST00000400540 FSD1Q9BTV5 496 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 NAPBQ9H115 298 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 GNEQ9Y223 722 aaKnown RBP14.17□□□□□ -0.14
LINC00544-201ENST00000400540 PTPRSQ13332 1948 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 TTC28Q96AY4 2481 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
LINC00544-201ENST00000400540 ALAS1P13196 640 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 SLC1A4P43007 532 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 NKX3-2P78367 333 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 CTDSPL2Q05D32 466 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 ZMYM1Q5SVZ6 1142 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 NOL8Q76FK4 1167 aaKnown RBP14.16□□□□□ -0.14
LINC00544-201ENST00000400540 EEPD1Q7L9B9 569 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 FBXO16Q8IX29 292 aaPredicted RBP14.16□□□□□ -0.14
LINC00544-201ENST00000400540 TMEM199Q8N511 208 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 TRERF1Q96PN7 1200 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 NACAP1Q9BZK3 213 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 IL17RBQ9NRM6 502 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 CXXC1Q9P0U4 656 aaPredicted RBP14.16□□□□□ -0.14
LINC00544-201ENST00000400540 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 MTMR7Q9Y216 660 aa14.16□□□□□ -0.14
LINC00544-201ENST00000400540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC00544-201ENST00000400540 GRIN2DO15399 1336 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 MYH6P13533 1939 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 FDX1P10109 184 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 SMPD1P17405 629 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 PSRC1Q6PGN9 363 aaPredicted RBP14.15□□□□□ -0.14
LINC00544-201ENST00000400540 FAM160B2Q86V87 743 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 CHURC1Q8WUH1 139 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 PPM1EQ8WY54 764 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 PRDM12Q9H4Q4 367 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 PRR12Q9ULL5 1215 aa14.15□□□□□ -0.14
LINC00544-201ENST00000400540 ASB14A6NK59 587 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 TSPY2A6NKD2 308 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 SLC3A2P08195 630 aaKnown RBP14.14□□□□□ -0.15
LINC00544-201ENST00000400540 PSMC6P62333 389 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 ITGA7Q13683 1181 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 FSCN1Q16658 493 aaKnown RBP14.14□□□□□ -0.15
LINC00544-201ENST00000400540 VPS53Q5VIR6 699 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 TAPT1Q6NXT6 567 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 TRPV6Q9H1D0 765 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 HIPK3Q9H422 1215 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 IL23AQ9NPF7 189 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 CYP39A1Q9NYL5 469 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 PCDHB15Q9Y5E8 787 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 TCF20Q9UGU0 1960 aaKnown RBP14.14□□□□□ -0.15
LINC00544-201ENST00000400540 SCN10AQ9Y5Y9 1956 aa14.14□□□□□ -0.15
LINC00544-201ENST00000400540 DYNC1LI2O43237 492 aaPredicted RBP14.13□□□□□ -0.15
LINC00544-201ENST00000400540 B4GALT4O60513 344 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 CCL23P55773 120 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 ADGRE1Q14246 886 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 LRRFIP1Q32MZ4 808 aaKnown RBP14.13□□□□□ -0.15
LINC00544-201ENST00000400540 TKFCQ3LXA3 575 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 NSMFQ6X4W1 530 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 HERVK_113Q902F9 699 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 GAS2L1Q99501 681 aaPredicted RBP14.13□□□□□ -0.15
LINC00544-201ENST00000400540 WNT8AQ9H1J5 351 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 NKX2-4Q9H2Z4 354 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 CCPG1Q9ULG6 757 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 COL4A4P53420 1690 aaPredicted RBP14.13□□□□□ -0.15
LINC00544-201ENST00000400540 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
LINC00544-201ENST00000400540 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
LINC00544-201ENST00000400540 ERC2O15083 957 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 PLA2G6O60733 806 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 MX1P20591 662 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 CCDC96Q2M329 555 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 TJAP1Q5JTD0 557 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 TTBK2Q6IQ55 1244 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 OTOP2Q7RTS6 562 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 AP5M1Q9H0R1 490 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 YBX2Q9Y2T7 364 aaKnown RBP14.12□□□□□ -0.15
LINC00544-201ENST00000400540 SALL3Q9BXA9 1300 aa14.12□□□□□ -0.15
LINC00544-201ENST00000400540 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
LINC00544-201ENST00000400540 RANBP6O60518 1105 aaKnown RBP14.11□□□□□ -0.15
LINC00544-201ENST00000400540 CABYRO75952 493 aa14.11□□□□□ -0.15
LINC00544-201ENST00000400540 SLC16A2P36021 539 aa14.11□□□□□ -0.15
LINC00544-201ENST00000400540 RABGGTBP53611 331 aa14.11□□□□□ -0.15
LINC00544-201ENST00000400540 CCDC85BQ15834 202 aaPredicted RBP14.11□□□□□ -0.15
LINC00544-201ENST00000400540 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
LINC00544-201ENST00000400540 VWCEQ96DN2 955 aa14.11□□□□□ -0.15
LINC00544-201ENST00000400540 SCLYQ96I15 445 aa14.11□□□□□ -0.15
LINC00544-201ENST00000400540 NOC4LQ9BVI4 516 aaKnown RBP14.11□□□□□ -0.15
LINC00544-201ENST00000400540 RANBP17Q9H2T7 1088 aaKnown RBP14.11□□□□□ -0.15
LINC00544-201ENST00000400540 FRMPD2Q68DX3 1309 aaPredicted RBP14.11□□□□□ -0.15
LINC00544-201ENST00000400540 NFIBO00712 420 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 FGBP02675 491 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 ICAM1P05362 532 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 MYOGP15173 224 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms