RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
LINC00649-202ENST00000400353 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
LINC00649-202ENST00000400353 COL11A2P13942 1736 aaPredicted RBP12.11□□□□□ -0.47
LINC00649-202ENST00000400353 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 H7C1D1 291 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 CASP1P29466 404 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 PBX1P40424 430 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 STX17P56962 302 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 AMPD3Q01432 767 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 MSL1Q68DK7 614 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 CDC42EP5Q6NZY7 148 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 TMEM139Q8IV31 216 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 TC2NQ8N9U0 490 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 MTRQ99707 1265 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 DDX4Q9NQI0 724 aaKnown RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 STK32BQ9NY57 414 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 MYH8P13535 1937 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 LRRC10BA6NIK2 292 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 CCNT1O60563 726 aaKnown RBP12.1□□□□□ -0.47
LINC00649-202ENST00000400353 MMP10P09238 476 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 CRKP46108 304 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 ZNF543Q08ER8 600 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 LETM2Q2VYF4 491 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 ZDHHC15Q96MV8 337 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 VAT1LQ9HCJ6 419 aa12.1□□□□□ -0.47
LINC00649-202ENST00000400353 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 SHMT1P34896 483 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 ETF1P62495 437 aaKnown RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 TMEM266Q2M3C6 531 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 STAMQ92783 540 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 CALML4Q96GE6 196 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 RAB34Q9BZG1 259 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 RGPD3A6NKT7 1758 aaPredicted RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 RGPD4Q7Z3J3 1758 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 LRRC47Q8N1G4 583 aaKnown RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 IGSF22Q8N9C0 903 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 DHTKD1Q96HY7 919 aaPredicted RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 C7orf25Q9BPX7 421 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 L2HGDHQ9H9P8 463 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 RIC8AQ9NPQ8 531 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 PPP2R2CQ9Y2T4 447 aa12.09□□□□□ -0.47
LINC00649-202ENST00000400353 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
LINC00649-202ENST00000400353 H0YIN7 160 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 PSMA7O14818 248 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00649-202ENST00000400353 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 COBLL1Q53SF7 1204 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
LINC00649-202ENST00000400353 IDI2Q9BXS1 227 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 LRRC27Q9C0I9 530 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 CPVLQ9H3G5 476 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 CGNQ9P2M7 1197 aaKnown RBP12.08□□□□□ -0.48
LINC00649-202ENST00000400353 STK17AQ9UEE5 414 aa12.08□□□□□ -0.48
LINC00649-202ENST00000400353 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 KCNJ18B7U540 433 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 SLC26A4O43511 780 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 KLRC4O43908 158 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 EEF1GP26641 437 aaKnown RBP12.07□□□□□ -0.48
LINC00649-202ENST00000400353 PRCPP42785 496 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 SCNN1DP51172 638 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 MRPL12P52815 198 aaKnown RBP12.07□□□□□ -0.48
LINC00649-202ENST00000400353 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
LINC00649-202ENST00000400353 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
LINC00649-202ENST00000400353 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 KRT31Q15323 416 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 TCP11X2Q5H9J9 407 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 CC2D2BQ6DHV5 1058 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 SYT10Q6XYQ8 523 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 RASGRP2Q7LDG7 609 aa12.07□□□□□ -0.48
LINC00649-202ENST00000400353 PDCL2Q8N4E4 241 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms