RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PAX7P23759 505 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 EVX2Q03828 476 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 NAA25Q14CX7 972 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 CCDC40Q4G0X9 1142 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 COL4A1P02462 1669 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 CHUKO15111 745 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 SKAP2O75563 359 aaPredicted RBP19.02■□□□□ 0.63
PTPRA-205ENST00000399903 ARID4AP29374 1257 aaPredicted RBP19.02■□□□□ 0.63
PTPRA-205ENST00000399903 KLK7P49862 253 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 HDLBPQ00341 1268 aaKnown RBP19.02■□□□□ 0.63
PTPRA-205ENST00000399903 KIF5AQ12840 1032 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 RTN1Q16799 776 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 TCP11X2Q5H9J9 407 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 CFAP58Q5T655 872 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 IFNL3Q8IZI9 196 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 AGPAT5Q9NUQ2 364 aa19.02■□□□□ 0.63
PTPRA-205ENST00000399903 UQCRFS1P1P0C7P4 283 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 CLNS1AP54105 237 aaKnown RBP19.01■□□□□ 0.63
PTPRA-205ENST00000399903 NTRK3Q16288 839 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 NFRKBQ6P4R8 1299 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 MICALCLQ6ZW33 695 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 ZIM3Q96PE6 472 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 MLXIPQ9HAP2 919 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 NCK2O43639 380 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 KRT83P78385 493 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.635e-6■■□□□ 11.7
PTPRA-205ENST00000399903 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
PTPRA-205ENST00000399903 LRWD1Q9UFC0 647 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 TAF1P21675 1872 aa19.01■□□□□ 0.63
PTPRA-205ENST00000399903 CYP7A1P22680 504 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 NAA35Q5VZE5 725 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 TICAM2Q86XR7 235 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 FAM217BQ9NTX9 383 aaPredicted RBP19■□□□□ 0.63
PTPRA-205ENST00000399903 TARSL2A2RTX5 802 aaKnown RBP19■□□□□ 0.63
PTPRA-205ENST00000399903 ZSCAN5CA6NGD5 496 aaPredicted RBP19■□□□□ 0.63
PTPRA-205ENST00000399903 CYLC1P35663 651 aaPredicted RBP19■□□□□ 0.63
PTPRA-205ENST00000399903 UBE3CQ15386 1083 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 LRCH2Q5VUJ6 765 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 IQCA1Q86XH1 822 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 WASF1Q92558 559 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 ZSWIM5Q9P217 1185 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 PPP1R12BO60237 982 aaPredicted RBP19■□□□□ 0.63
PTPRA-205ENST00000399903 TOM1O60784 492 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 MOCS3O95396 460 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 LSP1P33241 339 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 CCDC121Q6ZUS5 278 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 TRIM47Q96LD4 638 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 NFU1Q9UMS0 254 aa19■□□□□ 0.63
PTPRA-205ENST00000399903 B4DLN1 442 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 KIF1CO43896 1103 aaKnown RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 DYNLL1P63167 89 aaKnown RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 SPA17Q15506 151 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 C8orf74Q6P047 294 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 TBC1D31Q96DN5 1066 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 MAGEC2Q9UBF1 373 aaPredicted RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 THRAP3Q9Y2W1 955 aaKnown RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 PARP10Q53GL7 1025 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 ODF2Q5BJF6 829 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 AMOTL1Q8IY63 956 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 AENQ8WTP8 325 aaKnown RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 LY9Q9HBG7 655 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 PARP1P09874 1014 aaKnown RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 CCDC13Q8IYE1 715 aa18.99■□□□□ 0.63
PTPRA-205ENST00000399903 ZNF473Q8WTR7 871 aaKnown RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 GPR101Q96P66 508 aaPredicted RBP18.99■□□□□ 0.63
PTPRA-205ENST00000399903 AKAP11Q9UKA4 1901 aa18.98■□□□□ 0.63
PTPRA-205ENST00000399903 GSG1L2A8MUP6 293 aa18.98■□□□□ 0.63
PTPRA-205ENST00000399903 GBP2P32456 591 aaPredicted RBP18.98■□□□□ 0.63
PTPRA-205ENST00000399903 EARS2Q5JPH6 523 aaKnown RBP18.98■□□□□ 0.63
PTPRA-205ENST00000399903 EHBP1Q8NDI1 1231 aa18.98■□□□□ 0.63
PTPRA-205ENST00000399903 RPGRIP1Q96KN7 1286 aa18.98■□□□□ 0.63
PTPRA-205ENST00000399903 PAPD7Q5XG87 772 aaKnown RBP18.98■□□□□ 0.63
PTPRA-205ENST00000399903 SPATA4Q8NEY3 305 aa18.98■□□□□ 0.63
PTPRA-205ENST00000399903 CCDC42Q96M95 316 aa18.98■□□□□ 0.63
PTPRA-205ENST00000399903 NHEJ1Q9H9Q4 299 aaPredicted RBP18.98■□□□□ 0.63
PTPRA-205ENST00000399903 ERICH2A1L162 156 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 FMNL1O95466 1100 aaPredicted RBP18.97■□□□□ 0.63
PTPRA-205ENST00000399903 PLEKP08567 350 aaPredicted RBP18.97■□□□□ 0.63
PTPRA-205ENST00000399903 FNTAP49354 379 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 SPAG1Q07617 926 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 TYW1BQ6NUM6 668 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 IGDCC4Q8TDY8 1250 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 MS4A14Q96JA4 679 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 GSDMAQ96QA5 445 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 CCT8L2Q96SF2 557 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 SLC40A1Q9NP59 571 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 ZNF652Q9Y2D9 606 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 WNT7AO00755 349 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 PAFAH1B1P43034 410 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 NBPF5PQ86XG9 351 aaPredicted RBP18.97■□□□□ 0.63
PTPRA-205ENST00000399903 ABCC12Q96J65 1359 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 NWD2Q9ULI1 1742 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 BUB1O43683 1085 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 NR1D1P20393 614 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 VAV2P52735 878 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 GUCY2DQ02846 1103 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 FBXL16Q8N461 479 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 SH3GL2Q99962 352 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 KCNG1Q9UIX4 513 aa18.97■□□□□ 0.63
PTPRA-205ENST00000399903 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms