RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 NR1I2O75469 434 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 TNNI1P19237 187 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 ADCY8P40145 1251 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 MUM1L1Q5H9M0 696 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 FAM102BQ5T8I3 360 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 NELFCDQ8IXH7 590 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 CCDC170Q8IYT3 715 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 CCDC17Q96LX7 622 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 GBP5Q96PP8 586 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 XPOTO43592 962 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 MUM1Q2TAK8 710 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 MAP7D3Q8IWC1 876 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 MAP4K1Q92918 833 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 PLEKHF1Q96S99 279 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 CARMIL3Q8ND23 1372 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 KPNA2P52292 529 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 IL9RQ01113 521 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 ZSCAN26Q16670 478 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 GPATCH4Q5T3I0 446 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 FBXO11Q86XK2 927 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 TPH2Q8IWU9 490 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 USP40Q9NVE5 1235 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 PTCH1Q13635 1447 aa9.15□□□□□ -0.94
SPTLC3-201ENST00000399002 TTI1O43156 1089 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 PDE6AP16499 860 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 SEMA3FQ13275 785 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 DLGAP5Q15398 846 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 PPP4R3CPQ6ZMV5 832 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 TRIM56Q9BRZ2 755 aaKnown RBP9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 TMEM206Q9H813 350 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 LGR6Q9HBX8 967 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 CDC23Q9UJX2 597 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 PCDHA7Q9UN72 937 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 PCDHA12Q9UN75 941 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 CROCC2H7BZ55 1655 aa9.15□□□□□ -0.95
SPTLC3-201ENST00000399002 ZNF189O75820 626 aaPredicted RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 H2AFZP0C0S5 128 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 STMN1P16949 149 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 PDIA3P30101 505 aaKnown RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 SNCBQ16143 134 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ANKRD20A4Q4UJ75 823 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ANKRD20A8PQ5CZ79 823 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ANKRD20A2Q5SQ80 823 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ANKRD20A1Q5TYW2 823 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 H2AFVQ71UI9 128 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 MAPKAPK5Q8IW41 473 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 MAPK8IP1Q9UQF2 711 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ANKARQ7Z5J8 1434 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 PALM3A6NDB9 673 aaPredicted RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 CNPY4Q8N129 248 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 TNKSO95271 1327 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 PSMC2P35998 433 aaKnown RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ADKP55263 362 aaKnown RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 USH1GQ495M9 461 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 SYMPKQ92797 1274 aaKnown RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 RILPQ96NA2 401 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 TRIM31Q9BZY9 425 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 IQGAP3Q86VI3 1631 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ATP8B3O60423 1300 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 KRT19P08727 400 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 SP4Q02446 784 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 CASC4Q6P4E1 433 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 CABLES1Q8TDN4 633 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ADPGKQ9BRR6 497 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 WDR19Q8NEZ3 1342 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 A0A0D9SFI3 127 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 HIP1RO75146 1068 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 USP14P54578 494 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 RPS8P62241 208 aaKnown RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 SURF1Q15526 300 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ALS2CLQ60I27 953 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ACCSQ96QU6 501 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 PANX2Q96RD6 677 aa9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 EPN1Q9Y6I3 576 aaPredicted RBP9.14□□□□□ -0.95
SPTLC3-201ENST00000399002 ZNF233A6NK53 670 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 DDX39AO00148 427 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 SUN1O94901 812 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 CFBP00751 764 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 AFPP02771 609 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 CD19P15391 556 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 TRMT44Q8IYL2 757 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 USP28Q96RU2 1077 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 TBC1D7Q9P0N9 293 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 FAM8A1Q9UBU6 413 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 MED7O43513 233 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 S100BP04271 92 aaPredicted RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 PIK3CAP42336 1068 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 TECP42680 631 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 SATB1Q01826 763 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 ARHGAP44Q17R89 818 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 HSP90AA5PQ58FG0 334 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 SEPT14Q6ZU15 432 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms