RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 ORC4O43929 436 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 CDK7P50613 346 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 PDE1AP54750 535 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 BEX3Q00994 111 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
SRMP1-201ENST00000398959 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
SRMP1-201ENST00000398959 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
SRMP1-201ENST00000398959 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
SRMP1-201ENST00000398959 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRMP1-201ENST00000398959 ALX1Q15699 326 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 MCMDC2Q4G0Z9 681 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 NSMFQ6X4W1 530 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 MAFAQ8NHW3 353 aaPredicted RBP13.13□□□□□ -0.31
SRMP1-201ENST00000398959 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 AP5M1Q9H0R1 490 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
SRMP1-201ENST00000398959 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 CTAGE5O15320 804 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 ZEB2O60315 1214 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 FGAP02671 866 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 ICAM1P05362 532 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 FOSL2P15408 326 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 SLC16A2P36021 539 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 FAM126BQ8IXS8 530 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 PPP1R12CQ9BZL4 782 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 ASTN1O14525 1302 aa13.12□□□□□ -0.31
SRMP1-201ENST00000398959 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
SRMP1-201ENST00000398959 TANC1Q9C0D5 1861 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
SRMP1-201ENST00000398959 CABYRO75952 493 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 FGRP09769 529 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 HSPD1P10809 573 aaKnown RBP13.11□□□□□ -0.31
SRMP1-201ENST00000398959 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
SRMP1-201ENST00000398959 CSF2RAP15509 400 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 SMPD1P17405 629 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 DNAJB2P25686 324 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 NOVP48745 357 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 NKX3-2P78367 333 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
SRMP1-201ENST00000398959 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 CXCL17Q6UXB2 119 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 COL25A1Q9BXS0 654 aaPredicted RBP13.11□□□□□ -0.31
SRMP1-201ENST00000398959 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 PDGFCQ9NRA1 345 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 ADD3Q9UEY8 706 aaKnown RBP13.11□□□□□ -0.31
SRMP1-201ENST00000398959 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 SCN10AQ9Y5Y9 1956 aa13.11□□□□□ -0.31
SRMP1-201ENST00000398959 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 HAND2P61296 217 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 NMIQ13287 307 aaPredicted RBP13.1□□□□□ -0.31
SRMP1-201ENST00000398959 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 TMEM240Q5SV17 173 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
SRMP1-201ENST00000398959 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 PURBQ96QR8 312 aaKnown RBP13.1□□□□□ -0.31
SRMP1-201ENST00000398959 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 VTA1Q9NP79 307 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 TCP11L1Q9NUJ3 509 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
SRMP1-201ENST00000398959 CD4P01730 458 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 ACRP10323 421 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 PTGS1P23219 599 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 CYP2C18P33260 490 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
SRMP1-201ENST00000398959 MFAP1P55081 439 aaKnown RBP13.09□□□□□ -0.31
SRMP1-201ENST00000398959 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
SRMP1-201ENST00000398959 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
SRMP1-201ENST00000398959 TIFAQ96CG3 184 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 SEZ6LQ9BYH1 1024 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 Q9Y3F1 56 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 VCANP13611 3396 aa13.09□□□□□ -0.31
SRMP1-201ENST00000398959 NFIBO00712 420 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 PDHBP11177 359 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms