RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CYP2J2P51589 502 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 C8orf74Q6P047 294 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 SEPT14Q6ZU15 432 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 CELF1Q92879 486 aaKnown RBP15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 KANSL2Q9H9L4 492 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 LIG4P49917 911 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 UBXN2AP68543 259 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 STYK1Q6J9G0 422 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 KLHL7Q8IXQ5 586 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 ADD3Q9UEY8 706 aaKnown RBP15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 KRT40Q6A162 431 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 INTS8Q75QN2 995 aaKnown RBP15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 NBPF11Q86T75 865 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 FAM76AQ8TAV0 307 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 NAPGQ99747 312 aaPredicted RBP15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 ASIC3Q9UHC3 531 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 FANCCQ00597 558 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 ITKQ08881 620 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 CD209Q9NNX6 404 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 ZNF853P0CG23 659 aa15.71■□□□□ 0.1
PCDHA11-201ENST00000398640 MECOMQ03112 1051 aa15.71■□□□□ 0.1
PCDHA11-201ENST00000398640 PRR5LQ6MZQ0 368 aa15.71■□□□□ 0.1
PCDHA11-201ENST00000398640 PNMA1Q8ND90 353 aa15.71■□□□□ 0.1
PCDHA11-201ENST00000398640 ZNF202O95125 648 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 TUBB4BP68371 445 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 DIXDC1Q155Q3 683 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 FOXP4Q8IVH2 680 aaPredicted RBP15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 ADPGKQ9BRR6 497 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 NRKQ7Z2Y5 1582 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 E7EWF7 191 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 SGSM2O43147 1006 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 EVCP57679 992 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 CCDC110Q8TBZ0 833 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 WRNIP1Q96S55 665 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 CUL4BQ13620 913 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 ANKFY1Q9P2R3 1169 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 RIOK3O14730 519 aaKnown RBP15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 CAPN9O14815 690 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 CEP104O60308 925 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 PNOCQ13519 176 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 RPS6KC1Q96S38 1066 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 PCDHB13Q9Y5F0 798 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 IQGAP1P46940 1657 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 SYNJ2BP-COX16A0A087WUM0 186 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 COX16Q9P0S2 106 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 AKT3Q9Y243 479 aa15.7■□□□□ 0.1
PCDHA11-201ENST00000398640 EBAG9O00559 213 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 TRIM14Q14142 442 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 SECISBP2LQ93073 1101 aaKnown RBP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 COA7Q96BR5 231 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 STIM2Q9P246 746 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 STK25O00506 426 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 POLGP54098 1239 aaPredicted RBP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 POSTNQ15063 836 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 GIPC1O14908 333 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 SCYL2Q6P3W7 929 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 ZNF654Q8IZM8 581 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 TDRD3Q9H7E2 651 aaKnown RBP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 ADCY9O60503 1353 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 MAN1A1P33908 653 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 PPP1R16BQ96T49 567 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 CPDO75976 1380 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 ACTN4O43707 911 aaKnown RBP15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 ARPP19P56211 112 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 HDXQ7Z353 690 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 RTEL1Q9NZ71 1219 aa15.69■□□□□ 0.1
PCDHA11-201ENST00000398640 BCRP11274 1271 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 ATP5DP30049 168 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 KLHL30Q0D2K2 578 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 PSMD6Q15008 389 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 LRRIQ4A6NIV6 560 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 CLCN1P35523 988 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 EEPD1Q7L9B9 569 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 K7ENM7 598 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 NOL3O60936 208 aaKnown RBP15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 TECP42680 631 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 FAM160B1Q5W0V3 765 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 FAM207AQ9NSI2 230 aaPredicted RBP15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 CIB2O75838 187 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 TNNC2P02585 160 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 HS1BP3Q53T59 392 aa15.68■□□□□ 0.1
PCDHA11-201ENST00000398640 KLRF2D3W0D1 207 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 U2AF2P26368 475 aaKnown RBP eCLIP15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 TMOD1P28289 359 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 GPBP1Q86WP2 473 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 KIF9Q9HAQ2 790 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 NLRC4Q9NPP4 1024 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 DBNLQ9UJU6 430 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms