RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 BEND3Q5T5X7 828 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 TXLNBQ8N3L3 684 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 PGBD4Q96DM1 585 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 IL25Q9H293 177 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 CNNM2Q9H8M5 875 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 MRGBPQ9NV56 204 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 SPO11Q9Y5K1 396 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 FOXD2O60548 495 aaPredicted RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 U2AF2P26368 475 aaKnown RBP eCLIP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 RAB27AP51159 221 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CCNHP51946 323 aaPredicted RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 DMPKQ09013 629 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 KRT32Q14532 448 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CEP135Q66GS9 1140 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 KAZNQ674X7 775 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 SMYD5Q6GMV2 418 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 C16orf54Q6UWD8 224 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 BEND5Q7L4P6 421 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 C3orf20Q8ND61 904 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 RASSF8Q8NHQ8 419 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 EZH1Q92800 747 aaPredicted RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 RUFY1Q96T51 708 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 FANCFQ9NPI8 374 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 TUBA8Q9NY65 449 aaPredicted RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 HMG20BQ9P0W2 317 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 RBM8AQ9Y5S9 174 aaKnown RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 RASA4O43374 803 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 TCEA3O75764 348 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 BAG6P46379 1132 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CLCN2P51788 898 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 MTX1Q13505 466 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 ACAP1Q15027 740 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 PLEKHO1Q53GL0 409 aaPredicted RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 C1orf141Q5JVX7 400 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 SH2D4BQ5SQS7 431 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 VPS52Q8N1B4 723 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 KIAA1524Q8TCG1 905 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 TRIM5Q9C035 493 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 ENAMQ9NRM1 1142 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 ATG3Q9NT62 314 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 TMEM88BA6NKF7 163 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 BTBD11A6QL63 1104 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 OPA1O60313 960 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CPA1P15085 419 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 RCAN1P53805 252 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 EIF4A1P60842 406 aaKnown RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 TYRO3Q06418 890 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 PPP2R5CQ13362 524 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 SUZ12Q15022 739 aaKnown RBP7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 SMUG1Q53HV7 270 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CREB3L3Q68CJ9 461 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 CYP26C1Q6V0L0 522 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 ACMSDQ8TDX5 336 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 APPBP2Q92624 585 aa7.33□□□□□ -1.24
TM9SF4-202ENST00000398022 MEGF6O75095 1541 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 H3BQV1 296 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ATP6V1G1O75348 118 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 GCP02774 474 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 GRAMD1BQ3KR37 738 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 IFFO2Q5TF58 517 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 TCP11Q8WWU5 503 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ARHGEF2Q92974 986 aaKnown RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 TINF2Q9BSI4 451 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 SYNCQ9H7C4 482 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 PLEKHA5Q9HAU0 1116 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 PRRT4C9JH25 899 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 M0QX08 132 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 GLULP15104 373 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 S100A5P33763 92 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 UBA7P41226 1012 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 MAGEA10P43363 369 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ME3Q16798 604 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 BOLA3Q53S33 107 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ZC3H12BQ5HYM0 836 aaKnown RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 WDR45BQ5MNZ6 344 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 RSPH3Q86UC2 560 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 RNF168Q8IYW5 571 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 LRRC43Q8N309 656 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 FUCA2Q9BTY2 467 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 HDAC6Q9UBN7 1215 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ARPC4P59998 168 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 PTH1RQ03431 593 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 NAA16Q6N069 864 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF530Q6P9A1 599 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 HOOK3Q86VS8 718 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 GPIHBP1Q8IV16 184 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 TMEM151BQ8IW70 566 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 CEP57L1Q8IYX8 460 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 NECAB1Q8N987 351 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 EXOC4Q96A65 974 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 NRDE2Q9H7Z3 1164 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 AASDHPPTQ9NRN7 309 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms