RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 VPS54Q9P1Q0 977 aa22.44■■□□□ 1.18
MAP1LC3A-203ENST00000397709 ALAS1P13196 640 aa22.43■■□□□ 1.18
MAP1LC3A-203ENST00000397709 COPB2P35606 906 aa22.43■■□□□ 1.18
MAP1LC3A-203ENST00000397709 NAPAP54920 295 aa22.43■■□□□ 1.18
MAP1LC3A-203ENST00000397709 R3HDMLQ9H3Y0 253 aa22.43■■□□□ 1.18
MAP1LC3A-203ENST00000397709 SAGE1Q9NXZ1 904 aa22.43■■□□□ 1.18
MAP1LC3A-203ENST00000397709 MRPL11Q9Y3B7 192 aaKnown RBP22.43■■□□□ 1.18
MAP1LC3A-203ENST00000397709 SLC25A27O95847 323 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 SHCBP1Q8NEM2 672 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 CCDC148Q8NFR7 591 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 CCDC12Q8WUD4 166 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 CLEC4DQ8WXI8 215 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 C8orf76Q96K31 380 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 IPO9Q96P70 1041 aaKnown RBP22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 TRERF1Q96PN7 1200 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 GJB4Q9NTQ9 266 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 RNF146Q9NTX7 359 aa22.42■■□□□ 1.18
MAP1LC3A-203ENST00000397709 RBBP6Q7Z6E9 1792 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 ESYT2A0FGR8 921 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 OPLAHO14841 1288 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 TRPA1O75762 1119 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 XBP1P17861 261 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 CCNA1P78396 465 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 MAP2K1Q02750 393 aaPredicted RBP22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 RGS22Q8NE09 1264 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 CHST13Q8NET6 341 aa22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 CWC22Q9HCG8 908 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 DAXXQ9UER7 740 aaPredicted RBP22.41■■□□□ 1.18
MAP1LC3A-203ENST00000397709 TBC1D8O95759 1140 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 ERCC3P19447 782 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 FOSBP53539 338 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 MUM1L1Q5H9M0 696 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 FBXO18Q8NFZ0 1043 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 PHF20Q9BVI0 1012 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 ZMYND12Q9H0C1 365 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 PORCNQ9H237 461 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 ACAD9Q9H845 621 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 HOMER2Q9NSB8 354 aa22.4■■□□□ 1.18
MAP1LC3A-203ENST00000397709 NFIBO00712 420 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PDCP20941 246 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 NPY5RQ15761 445 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 LARP1BQ659C4 914 aaKnown RBP22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 KRT40Q6A162 431 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 NCAPG2Q86XI2 1143 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MROH8Q9H579 483 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 FBXO40Q9UH90 709 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 KCNJ14Q9UNX9 436 aa22.39■■□□□ 1.17
MAP1LC3A-203ENST00000397709 SMCO2A6NFE2 343 aa22.38■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GHRHRQ02643 423 aa22.38■■□□□ 1.17
MAP1LC3A-203ENST00000397709 TRIM29Q14134 588 aa22.38■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MAF1Q9H063 256 aa22.38■■□□□ 1.17
MAP1LC3A-203ENST00000397709 EFCC1Q9HA90 598 aa22.38■■□□□ 1.17
MAP1LC3A-203ENST00000397709 RIC8AQ9NPQ8 531 aa22.38■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MMP1P03956 469 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 SYT1P21579 422 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GNA11P29992 359 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 ADCY7P51828 1080 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 NLRP5P59047 1200 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GALNT17Q6IS24 598 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MCF2L2Q86YR7 1114 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 TEX2Q8IWB9 1127 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 DAGLBQ8NCG7 672 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CUL5Q93034 780 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GLT8D2Q9H1C3 349 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PSTPIP2Q9H939 334 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 C6orf50Q9HD87 102 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PCDHA4Q9UN74 947 aa22.37■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CALML3P27482 149 aa22.36■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MAPK4P31152 587 aa22.36■■□□□ 1.17
MAP1LC3A-203ENST00000397709 DDIT3P35638 169 aa22.36■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GUCY1B3Q02153 619 aa22.36■■□□□ 1.17
MAP1LC3A-203ENST00000397709 SAMD3Q8N6K7 520 aa22.36■■□□□ 1.17
MAP1LC3A-203ENST00000397709 TBC1D5Q92609 795 aa22.36■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CEP350Q5VT06 3117 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 H3BQV1 296 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PIK3CDO00329 1044 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MEIS2O14770 477 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 ADAMTS3O15072 1205 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 HSD17B4P51659 736 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MRPL12P52815 198 aaKnown RBP22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 NOM1Q5C9Z4 860 aaKnown RBP22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 IFFO2Q5TF58 517 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 A1CFQ9NQ94 594 aaKnown RBP22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 PLXNB2O15031 1838 aa22.35■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GCOM1H8Y6P7 765 aaPredicted RBP22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 M0R2N6 131 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 STX6O43752 255 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 POLR2MP0CAP2 368 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CLK2P49760 499 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 NSMFQ6X4W1 530 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 GPR142Q7Z601 462 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 CCAR1Q8IX12 1150 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 BLIDQ8IZY5 108 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 BICD2Q8TD16 824 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 BEGAINQ9BUH8 593 aa22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MAP3K20Q9NYL2 800 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3A-203ENST00000397709 MGAMO43451 1857 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms