RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TCP11L1Q9NUJ3 509 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CAPN11Q9UMQ6 739 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 A0A087WUV0 522 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 TLDC2A0PJX2 215 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CAVIN4Q5BKX8 364 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 MMGT1Q8N4V1 131 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PAGE5Q96GU1 130 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CABS1Q96KC9 395 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 FAM184BQ9ULE4 1060 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 SLC4A4Q9Y6R1 1079 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PPP1R3GB7ZBB8 358 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 G3V3G9 751 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 HGSO14964 777 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CCT6AP40227 531 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 ATP1A2P50993 1020 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 NNTQ13423 1086 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 DCAF8Q5TAQ9 597 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 DZIP3Q86Y13 1208 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 COG1Q8WTW3 980 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PHKBQ93100 1093 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 BSDC1Q9NW68 430 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 GGA2Q9UJY4 613 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC194A0A1B0GVG4 234 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 EXOC5O00471 708 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PLCG2P16885 1265 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 SNCBQ16143 134 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PPP2R5EQ16537 467 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 FAM163AQ96GL9 167 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 TSG101Q99816 390 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 HINFPQ9BQA5 517 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 RIC8AQ9NPQ8 531 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 C10orf71Q711Q0 1435 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 NDUFA10O95299 355 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 GYPCP04921 128 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PROM2Q8N271 834 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 CTNNBL1Q8WYA6 563 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 TBC1D31Q96DN5 1066 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PURBQ96QR8 312 aaKnown RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 TIAM2Q8IVF5 1701 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 XDHP47989 1333 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 A0A087WWV3 80 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 TRIM66O15016 1216 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 CHGBP05060 677 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 RPSAP08865 295 aaKnown RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 USP14P54578 494 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 KIF5AQ12840 1032 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 KRT31Q15323 416 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 E2F5Q15329 346 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PKN1Q16512 942 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 MMS22LQ6ZRQ5 1243 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 LMNTD2Q8IXW0 634 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 ENAHQ8N8S7 591 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 N4BP2L2Q92802 583 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 AIFM3Q96NN9 605 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PPP1R12CQ9BZL4 782 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 SPATS2LQ9NUQ6 558 aaKnown RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PCDHB6Q9Y5E3 794 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 SAR1BQ9Y6B6 198 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 GPIHBP1Q8IV16 184 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 TSGA10Q9BZW7 698 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 RNF40O75150 1001 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 ADAMTS2O95450 1211 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 SRGNP10124 158 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 CENPPQ6IPU0 288 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 C8orf74Q6P047 294 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 SAMD1Q6SPF0 538 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PI16Q6UXB8 463 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 FBXO33Q7Z6M2 555 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 MXD3Q9BW11 206 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 CSRNP2Q9H175 543 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 ABHD10Q9NUJ1 306 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 MAGEA9P43362 315 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 LRRC63Q05C16 580 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PSMD2Q13200 908 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC40Q4G0X9 1142 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 TRMT44Q8IYL2 757 aaKnown RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PPANQ9NQ55 473 aaKnown RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 CTNND2Q9UQB3 1225 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 GCFC2P16383 781 aaKnown RBP6.04□□□□□ -1.44
PTPRD-205ENST00000397611 NOVP48745 357 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 ATP11AP98196 1134 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 C3orf20Q8ND61 904 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 SLF1Q9BQI6 1058 aa6.04□□□□□ -1.44
PTPRD-205ENST00000397611 VIMP08670 466 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 PDIA5Q14554 519 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 SOGA3Q5TF21 947 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TRIM68Q6AZZ1 485 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 PDXDC2PQ6P474 469 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TRAPPC11Q7Z392 1133 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC42Q96M95 316 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 DISC1Q9NRI5 854 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF507Q8TCN5 953 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 JAKMIP2Q96AA8 810 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CLIC6Q96NY7 704 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 ZCCHC17Q9NP64 241 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms