RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 GNAQP50148 359 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 FBXO11Q86XK2 927 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 FBXL16Q8N461 479 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 AGXT2Q9BYV1 514 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 PLXNA1Q9UIW2 1896 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 KIAA0100Q14667 2235 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 GOLGA8BA8MQT2 603 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 NFIBO00712 420 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 ZBTB5O15062 677 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 ZNF792Q3KQV3 632 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 NSMFQ6X4W1 530 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 MAML3Q96JK9 1138 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 PIGSQ96S52 555 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 LZTS2Q9BRK4 669 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 SPZ1Q9BXG8 430 aa24.61■■□□□ 1.53
TSPAN4-206ENST00000397408 PFASO15067 1338 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 DNAJC25-GNG10A0A024R161 153 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 GOLGA8AA7E2F4 631 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 RTN1Q16799 776 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 OLFML2BQ68BL8 750 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 TMTC3Q6ZXV5 915 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 CMTR1Q8N1G2 835 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 SRBD1Q8N5C6 995 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 CLEC4DQ8WXI8 215 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 PIBF1Q8WXW3 757 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 UNC93B1Q9H1C4 597 aa24.6■■□□□ 1.53
TSPAN4-206ENST00000397408 ABCB11O95342 1321 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 CCL5P13501 91 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 PRKAR2AP13861 404 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 RCAN1P53805 252 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 SOX10P56693 466 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 TOB2Q14106 344 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 MFSD14CQ5VZR4 134 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 AMNQ9BXJ7 453 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 PDRG1Q9NUG6 133 aa24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 RBM28Q9NW13 759 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 DIS3Q9Y2L1 958 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-206ENST00000397408 PPP1R11O60927 126 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 SMARCA1P28370 1054 aa24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 CYP2C19P33261 490 aa24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 MAP3K21Q5TCX8 1036 aa24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 IL17RAQ96F46 866 aa24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 RNF208Q9H0X6 261 aa24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 CYP39A1Q9NYL5 469 aa24.58■■□□□ 1.53
TSPAN4-206ENST00000397408 POTEB2H3BUK9 544 aa24.57■■□□□ 1.52
TSPAN4-206ENST00000397408 METAP2P50579 478 aaKnown RBP eCLIP24.57■■□□□ 1.52
TSPAN4-206ENST00000397408 CACNB2Q08289 660 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-206ENST00000397408 TMEM106CQ9BVX2 250 aa24.57■■□□□ 1.52
TSPAN4-206ENST00000397408 PNMA6FA0A0J9YX94 578 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 PTPDC1A2A3K4 754 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 IGHA2P01877 340 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 CNTN2Q02246 1040 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 SLC30A10Q6XR72 485 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 CCDC82Q8N4S0 544 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 RRP36Q96EU6 259 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 FGD4Q96M96 766 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 BRCA2P51587 3418 aa24.56■■□□□ 1.52
TSPAN4-206ENST00000397408 BAATQ14032 418 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 FAM133AQ8N9E0 248 aa24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.55■■□□□ 1.522e-6■■■■□ 22.9
TSPAN4-206ENST00000397408 HMX1Q9NP08 348 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 SEC63Q9UGP8 760 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 MRPL11Q9Y3B7 192 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 PCDHA1Q9Y5I3 950 aa24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 RPTORQ8N122 1335 aa24.55■■□□□ 1.52
TSPAN4-206ENST00000397408 RBBP6Q7Z6E9 1792 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 CDC27P30260 824 aa24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 RNF207Q6ZRF8 634 aa24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 TINF2Q9BSI4 451 aa24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 FAM217BQ9NTX9 383 aaPredicted RBP24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 NID2Q14112 1375 aa24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 LCTP09848 1927 aa24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 CNTNAP5Q8WYK1 1306 aa24.54■■□□□ 1.52
TSPAN4-206ENST00000397408 POTEFA5A3E0 1075 aa24.53■■□□□ 1.52
TSPAN4-206ENST00000397408 CALML3P27482 149 aa24.53■■□□□ 1.52
TSPAN4-206ENST00000397408 EVCP57679 992 aa24.53■■□□□ 1.52
TSPAN4-206ENST00000397408 TRAF1Q13077 416 aa24.53■■□□□ 1.52
TSPAN4-206ENST00000397408 ZNF467Q7Z7K2 595 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-206ENST00000397408 LARP6Q9BRS8 491 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-206ENST00000397408 hCG_1642624A0A1W2PR95 340 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 SOWAHBA6NEL2 793 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 CCND3P30281 292 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 RPS6P62753 249 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 PURBQ96QR8 312 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 C22orf23Q9BZE7 217 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 PAK6Q9NQU5 681 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 CCDC196A0A1B0GTZ2 297 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 GJB1P08034 283 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 CYBAP13498 195 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 PDIA3P30101 505 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 ADD1P35611 737 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 PPP2R5BQ15173 497 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 IFFO2Q5TF58 517 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 MCF2L2Q86YR7 1114 aa24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 MSL3Q8N5Y2 521 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-206ENST00000397408 ASTN1O14525 1302 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 SYNGAP1Q96PV0 1343 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 MCM3APO60318 1980 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 OPLAHO14841 1288 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 FUT2Q10981 343 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms