RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RRP9O43818 475 aaKnown RBP17■□□□□ 0.31
TM9SF1-202ENST00000396854 FOSBP53539 338 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
TM9SF1-202ENST00000396854 IFFO2Q5TF58 517 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 TYW1BQ6NUM6 668 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 BRI3BPQ8WY22 251 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 AMNQ9BXJ7 453 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
TM9SF1-202ENST00000396854 VWA5AO00534 786 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 LBX2Q6XYB7 198 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 ANKRD23Q86SG2 305 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
TM9SF1-202ENST00000396854 ATG4CQ96DT6 458 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 FUCA2Q9BTY2 467 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 PHF20Q9BVI0 1012 aa17■□□□□ 0.31
TM9SF1-202ENST00000396854 MANSC4A6NHS7 340 aaPredicted RBP16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 MMP1P03956 469 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 SNAP25P60880 206 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 TRAF1Q13077 416 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 FBXO11Q86XK2 927 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 ZNF536O15090 1300 aa16.99■□□□□ 0.31
TM9SF1-202ENST00000396854 ESYT2A0FGR8 921 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 RASSF10A6NK89 507 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 ICAM1P05362 532 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 GUCY1B3Q02153 619 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 ZMYND12Q9H0C1 365 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 PNMA2Q9UL42 364 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 BTBD19C9JJ37 291 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 ZBED4O75132 1171 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 OSBPP22059 807 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 OAZ1P54368 228 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 NAPAP54920 295 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 RESTQ13127 1097 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 COA7Q96BR5 231 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 KCNJ14Q9UNX9 436 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
TM9SF1-202ENST00000396854 ATP2A1O14983 1001 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 PTMAP06454 111 aaKnown RBP16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 CALML3P27482 149 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 NPY5RQ15761 445 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 CCDC174Q6PII3 467 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 DAGLBQ8NCG7 672 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 ELP1O95163 1332 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 INHBEP58166 350 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 HERVK_113P62684 666 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 MB21D1Q8N884 522 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 PTPN18Q99952 460 aa16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 ZNF214Q9UL59 606 aaPredicted RBP16.97■□□□□ 0.31
TM9SF1-202ENST00000396854 PDHXO00330 501 aa16.96■□□□□ 0.31
TM9SF1-202ENST00000396854 NLRP5P59047 1200 aa16.96■□□□□ 0.31
TM9SF1-202ENST00000396854 SAFBQ15424 915 aaKnown RBP eCLIP16.96■□□□□ 0.31
TM9SF1-202ENST00000396854 CTDP1Q9Y5B0 961 aaPredicted RBP16.96■□□□□ 0.31
TM9SF1-202ENST00000396854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
TM9SF1-202ENST00000396854 ABCB11O95342 1321 aa16.96■□□□□ 0.31
TM9SF1-202ENST00000396854 GNA11P29992 359 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 KRT85P78386 507 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 HSP90AA2PQ14568 343 aaPredicted RBP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 USH1GQ495M9 461 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 POTEEQ6S8J3 1075 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 DIS3L2Q8IYB7 885 aaKnown RBP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 GTF3C2Q8WUA4 911 aaPredicted RBP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 USP25Q9UHP3 1055 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 CCPG1Q9ULG6 757 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 PCDHA4Q9UN74 947 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 SMCO2A6NFE2 343 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 U2AF2P26368 475 aaKnown RBP eCLIP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 KRT2P35908 639 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 TMEM132BQ14DG7 1078 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 DEFB115Q30KQ5 88 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 AGBL1Q96MI9 1066 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 BRMS1Q9HCU9 246 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
TM9SF1-202ENST00000396854 THSD7BQ9C0I4 1608 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 BLIDQ8IZY5 108 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 CPXCR1Q8N123 301 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 GLT8D2Q9H1C3 349 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 RIC8AQ9NPQ8 531 aa16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 MRPL11Q9Y3B7 192 aaKnown RBP16.94■□□□□ 0.3
TM9SF1-202ENST00000396854 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms