RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
NEDD8-202ENST00000396828 RNF146Q9NTX7 359 aa12.21□□□□□ -0.45
NEDD8-202ENST00000396828 TBX21Q9UL17 535 aa12.21□□□□□ -0.45
NEDD8-202ENST00000396828 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
NEDD8-202ENST00000396828 SYNPO2Q9UMS6 1093 aa12.21□□□□□ -0.45
NEDD8-202ENST00000396828 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
NEDD8-202ENST00000396828 MTMR7Q9Y216 660 aa12.21□□□□□ -0.45
NEDD8-202ENST00000396828 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 A0A0D9SFI3 127 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 ALAS1P13196 640 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 GSPT1P15170 499 aaKnown RBP12.2□□□□□ -0.46
NEDD8-202ENST00000396828 SDSP20132 328 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 CST5P28325 142 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-202ENST00000396828 SLC1A4P43007 532 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 FPGSQ05932 587 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 TTBK2Q6IQ55 1244 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.2□□□□□ -0.46
NEDD8-202ENST00000396828 NUP133Q8WUM0 1156 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
NEDD8-202ENST00000396828 FAM227BQ96M60 508 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.465e-9■□□□□ 8.6
NEDD8-202ENST00000396828 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 FBXO40Q9UH90 709 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 PRR12Q9ULL5 1215 aa12.2□□□□□ -0.46
NEDD8-202ENST00000396828 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 TSPY2A6NKD2 308 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 DCDC2CA8MYV0 355 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 RANBP6O60518 1105 aaKnown RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 TIMP1P01033 207 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 SLC3A2P08195 630 aaKnown RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 SMPD1P17405 629 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 SLC16A2P36021 539 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 NOVP48745 357 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 LRRFIP1Q32MZ4 808 aaKnown RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 GNASQ5JWF2 1037 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 RCSD1Q6JBY9 416 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 EEPD1Q7L9B9 569 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 CHURC1Q8WUH1 139 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 ANAPC4Q9UJX5 808 aa12.19□□□□□ -0.46
NEDD8-202ENST00000396828 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
NEDD8-202ENST00000396828 ELP1O95163 1332 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 GRXCR1A8MXD5 290 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 ARVCFO00192 962 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 PLA2G6O60733 806 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 CDC45O75419 566 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 FGAP02671 866 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 FGRP09769 529 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 ACRP10323 421 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 CSF2RAP15509 400 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 NKX3-2P78367 333 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 MFSD5Q6N075 450 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 TAPT1Q6NXT6 567 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 FAM126BQ8IXS8 530 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 PPP1R12CQ9BZL4 782 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
NEDD8-202ENST00000396828 TRANK1O15050 2925 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 UMODL1Q5DID0 1318 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 CD4P01730 458 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 FDX1P10109 184 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 PBX2P40425 430 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 GRIN2CQ14957 1233 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 TMEM240Q5SV17 173 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 FBXO16Q8IX29 292 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-202ENST00000396828 PCSK9Q8NBP7 692 aaKnown RBP12.17□□□□□ -0.46
NEDD8-202ENST00000396828 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-202ENST00000396828 TMEM47Q9BQJ4 181 aa12.17□□□□□ -0.46
NEDD8-202ENST00000396828 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 NFIBO00712 420 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 DYNC1LI2O43237 492 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 ORC4O43929 436 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 HSPD1P10809 573 aaKnown RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 CYP2C18P33260 490 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 HAND2P61296 217 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 PSMC6P62333 389 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 ALX1Q15699 326 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 C8orf34Q49A92 452 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 RRP12Q5JTH9 1297 aaKnown RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 NSMFQ6X4W1 530 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
NEDD8-202ENST00000396828 SPC25Q9HBM1 224 aa12.16□□□□□ -0.46
NEDD8-202ENST00000396828 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms