RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TCP11L1Q9NUJ3 509 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 PRR12Q9ULL5 1215 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 ISY1Q9ULR0 285 aaKnown RBP19.26■□□□□ 0.67
CLTA-203ENST00000396603 GNEQ9Y223 722 aaKnown RBP19.26■□□□□ 0.67
CLTA-203ENST00000396603 CTAGE5O15320 804 aa19.25■□□□□ 0.67
CLTA-203ENST00000396603 IQSEC1Q6DN90 963 aa19.25■□□□□ 0.67
CLTA-203ENST00000396603 TMEM199Q8N511 208 aa19.25■□□□□ 0.67
CLTA-203ENST00000396603 SLC43A3Q8NBI5 491 aa19.25■□□□□ 0.67
CLTA-203ENST00000396603 CYP39A1Q9NYL5 469 aa19.25■□□□□ 0.67
CLTA-203ENST00000396603 SOWAHBA6NEL2 793 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 ZEB2O60315 1214 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 ALAS1P13196 640 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 PDE1AP54750 535 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 CTDSPL2Q05D32 466 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 PSRC1Q6PGN9 363 aaPredicted RBP19.24■□□□□ 0.67
CLTA-203ENST00000396603 KCTD1Q719H9 257 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 RANBP17Q9H2T7 1088 aaKnown RBP19.24■□□□□ 0.67
CLTA-203ENST00000396603 RWDD1Q9H446 243 aaPredicted RBP19.24■□□□□ 0.67
CLTA-203ENST00000396603 VTA1Q9NP79 307 aa19.24■□□□□ 0.67
CLTA-203ENST00000396603 RANBP6O60518 1105 aaKnown RBP19.23■□□□□ 0.67
CLTA-203ENST00000396603 CD4P01730 458 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 TOP1P11387 765 aaKnown RBP19.23■□□□□ 0.67
CLTA-203ENST00000396603 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 ANKRD45Q5TZF3 282 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 RASIP1Q5U651 963 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 TLK2Q86UE8 772 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 MAFAQ8NHW3 353 aaPredicted RBP19.23■□□□□ 0.67
CLTA-203ENST00000396603 VTI1AQ96AJ9 217 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 MAF1Q9H063 256 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
CLTA-203ENST00000396603 CCPG1Q9ULG6 757 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
CLTA-203ENST00000396603 CUL9Q8IWT3 2517 aa19.22■□□□□ 0.67
CLTA-203ENST00000396603 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
CLTA-203ENST00000396603 TTC14Q96N46 770 aa19.22■□□□□ 0.67
CLTA-203ENST00000396603 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.22■□□□□ 0.677e-6■□□□□ 9.4
CLTA-203ENST00000396603 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
CLTA-203ENST00000396603 LRRC37A2A6NM11 1700 aa19.22■□□□□ 0.67
CLTA-203ENST00000396603 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.21■□□□□ 0.67
CLTA-203ENST00000396603 NMT2O60551 498 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 FGAP02671 866 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 NEFLP07196 543 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 FOSL2P15408 326 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 DNAJB2P25686 324 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 VPS53Q5VIR6 699 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 TAPT1Q6NXT6 567 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 COL25A1Q9BXS0 654 aaPredicted RBP19.21■□□□□ 0.67
CLTA-203ENST00000396603 ASTN1O14525 1302 aa19.21■□□□□ 0.67
CLTA-203ENST00000396603 SMPD1P17405 629 aa19.2■□□□□ 0.66
CLTA-203ENST00000396603 MFAP1P55081 439 aaKnown RBP19.2■□□□□ 0.66
CLTA-203ENST00000396603 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
CLTA-203ENST00000396603 CCDC96Q2M329 555 aa19.2■□□□□ 0.66
CLTA-203ENST00000396603 MUM1L1Q5H9M0 696 aa19.2■□□□□ 0.66
CLTA-203ENST00000396603 TMEM240Q5SV17 173 aa19.2■□□□□ 0.66
CLTA-203ENST00000396603 NOL8Q76FK4 1167 aaKnown RBP19.2■□□□□ 0.66
CLTA-203ENST00000396603 MTIF3Q9H2K0 278 aaKnown RBP19.2■□□□□ 0.66
CLTA-203ENST00000396603 WDR19Q8NEZ3 1342 aa19.2■□□□□ 0.66
CLTA-203ENST00000396603 MCM3APO60318 1980 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 HSPD1P10809 573 aaKnown RBP19.19■□□□□ 0.66
CLTA-203ENST00000396603 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 DUSP28Q4G0W2 176 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 SYDE2Q5VT97 1194 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 NSMFQ6X4W1 530 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 MYLIPQ8WY64 445 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 TIFAQ96CG3 184 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 MPHOSPH6Q99547 160 aaKnown RBP19.19■□□□□ 0.66
CLTA-203ENST00000396603 TMEM47Q9BQJ4 181 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 RNF41Q9H4P4 317 aaPredicted RBP19.19■□□□□ 0.66
CLTA-203ENST00000396603 IL23AQ9NPF7 189 aa19.19■□□□□ 0.66
CLTA-203ENST00000396603 EYSQ5T1H1 3165 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 SNHG28P0DPA3 235 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 CSF2RAP15509 400 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 IRX6P78412 446 aaPredicted RBP19.18■□□□□ 0.66
CLTA-203ENST00000396603 BEX3Q00994 111 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 CXCL17Q6UXB2 119 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 C16orf59Q7L2K0 433 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 INCENPQ9NQS7 918 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 CCDC171Q6TFL3 1326 aa19.18■□□□□ 0.66
CLTA-203ENST00000396603 A0A0D9SFI3 127 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 RBM47A0AV96 593 aaKnown RBP19.17■□□□□ 0.66
CLTA-203ENST00000396603 DYNC1LI2O43237 492 aaPredicted RBP19.17■□□□□ 0.66
CLTA-203ENST00000396603 PDHBP11177 359 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 ALDH5A1P51649 535 aaPredicted RBP19.17■□□□□ 0.66
CLTA-203ENST00000396603 GPATCH4Q5T3I0 446 aaKnown RBP19.17■□□□□ 0.66
CLTA-203ENST00000396603 FBXO16Q8IX29 292 aaPredicted RBP19.17■□□□□ 0.66
CLTA-203ENST00000396603 DNERQ8NFT8 737 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 HERVK_113Q902F9 699 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 FAM227BQ96M60 508 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 HIPK3Q9H422 1215 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 ZNF576Q9H609 170 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 TOMM22Q9NS69 142 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 POLR3EQ9NVU0 708 aa19.17■□□□□ 0.66
CLTA-203ENST00000396603 B4DLN1 442 aa19.16■□□□□ 0.66
CLTA-203ENST00000396603 NKRFO15226 690 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLTA-203ENST00000396603 CPT1AP50416 773 aa19.16■□□□□ 0.66
CLTA-203ENST00000396603 MRPL12P52815 198 aaKnown RBP19.16■□□□□ 0.66
CLTA-203ENST00000396603 ZNF543Q08ER8 600 aa19.16■□□□□ 0.66
CLTA-203ENST00000396603 BAATQ14032 418 aaPredicted RBP19.16■□□□□ 0.66
CLTA-203ENST00000396603 RAB30Q15771 203 aa19.16■□□□□ 0.66
CLTA-203ENST00000396603 CCDC178Q5BJE1 867 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms