RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NDUFA8P51970 172 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 FAM160A1Q05DH4 1040 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 PRKG1Q13976 671 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 NONOQ15233 471 aaKnown RBP eCLIP14.52□□□□□ -0.08
TRIM39-204ENST00000396548 JMYQ8N9B5 988 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 KIFC2Q96AC6 838 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 SLF1Q9BQI6 1058 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.08
TRIM39-204ENST00000396548 PIK3CDO00329 1044 aa14.52□□□□□ -0.09
TRIM39-204ENST00000396548 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.09
TRIM39-204ENST00000396548 UBE2SQ16763 222 aa14.52□□□□□ -0.09
TRIM39-204ENST00000396548 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.09
TRIM39-204ENST00000396548 RPAP3Q9H6T3 665 aaPredicted RBP14.52□□□□□ -0.09
TRIM39-204ENST00000396548 SLC38A10Q9HBR0 1119 aa14.52□□□□□ -0.09
TRIM39-204ENST00000396548 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 MRPL12P52815 198 aaKnown RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 PTGDRQ13258 359 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 EAPPQ56P03 285 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 JAKMIP3Q5VZ66 844 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 FSIP1Q8NA03 581 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 SYAP1Q96A49 352 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 CLSTN2Q9H4D0 955 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 PPP1R9AQ9ULJ8 1098 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 LDLRAD1Q5T700 205 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 REPS2Q8NFH8 660 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 TBCKQ8TEA7 893 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 FUCA2Q9BTY2 467 aa14.51□□□□□ -0.09
TRIM39-204ENST00000396548 DDX19AQ9NUU7 478 aaKnown RBP14.51□□□□□ -0.09
TRIM39-204ENST00000396548 A0A1B0GVL5 298 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 ATP2B1P20020 1258 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 GHRHRQ02643 423 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 ORC2Q13416 577 aaPredicted RBP14.5□□□□□ -0.09
TRIM39-204ENST00000396548 TPRNQ4KMQ1 711 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 MOB2Q70IA6 237 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L19D6RCP7 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L20D6RJB6 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 ICAM1P05362 532 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 PFKFB1P16118 471 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 HMGCS2P54868 508 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L24Q0WX57 530 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USH1GQ495M9 461 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 USP17L6PQ6QN14 398 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 NEK8Q86SG6 692 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 SYCE3A1L190 88 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 ARL6IP4Q66PJ3 421 aaKnown RBP14.5□□□□□ -0.09
TRIM39-204ENST00000396548 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 CLMNQ96JQ2 1002 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 TMEM60Q9H2L4 133 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 RRAGCQ9HB90 399 aa14.5□□□□□ -0.09
TRIM39-204ENST00000396548 MCM7P33993 719 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 PPATQ06203 517 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 LRSAM1Q6UWE0 723 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 CATSPERGQ6ZRH7 1159 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 ANKRD13AQ8IZ07 590 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 RBM46Q8TBY0 533 aaKnown RBP14.49□□□□□ -0.09
TRIM39-204ENST00000396548 CSRNP2Q9H175 543 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 SPDYE5A6NIY4 337 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
TRIM39-204ENST00000396548 MOGSQ13724 837 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 CCDC174Q6PII3 467 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 LDHDQ86WU2 507 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 CLEC4DQ8WXI8 215 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 WNK4Q96J92 1243 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 MBOAT7Q96N66 472 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 ABCB11O95342 1321 aa14.49□□□□□ -0.09
TRIM39-204ENST00000396548 A0A0G2JLL6 359 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-204ENST00000396548 LETM1O95202 739 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-204ENST00000396548 PRPHP41219 470 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 TRAF1Q13077 416 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 AP3B2Q13367 1082 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 PPP4R3AQ6IN85 833 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 POTEEQ6S8J3 1075 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 PRRT2Q7Z6L0 340 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-204ENST00000396548 KCNH4Q9UQ05 1017 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 UNCXA6NJT0 531 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 LAD1O00515 517 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 VWA5AO00534 786 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 MCTP2Q6DN12 878 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 AGBL1Q96MI9 1066 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 MTMR9Q96QG7 549 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 CSADQ9Y600 493 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 TRAF5O00463 557 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 CYP3A7P24462 503 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 DSG3P32926 999 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 NF2P35240 595 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 FMR1Q06787 632 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRIM39-204ENST00000396548 MAP1SQ66K74 1059 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-204ENST00000396548 TANGO6Q9C0B7 1094 aa14.48□□□□□ -0.09
TRIM39-204ENST00000396548 ELP3Q9H9T3 547 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms