RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TLE2Q04725 743 aa21.51■■□□□ 1.03
FXN-203ENST00000396366 KCNA10Q16322 511 aa21.51■■□□□ 1.03
FXN-203ENST00000396366 IMMTQ16891 758 aaKnown RBP21.51■■□□□ 1.03
FXN-203ENST00000396366 CCSAPQ6IQ19 270 aaPredicted RBP21.51■■□□□ 1.03
FXN-203ENST00000396366 TDHQ8IZJ6 230 aa21.51■■□□□ 1.03
FXN-203ENST00000396366 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.5■■□□□ 1.03
FXN-203ENST00000396366 NFIBO00712 420 aa21.5■■□□□ 1.03
FXN-203ENST00000396366 PTGS1P23219 599 aa21.5■■□□□ 1.03
FXN-203ENST00000396366 C1orf53Q5VUE5 145 aa21.5■■□□□ 1.03
FXN-203ENST00000396366 DGKHQ86XP1 1220 aa21.5■■□□□ 1.03
FXN-203ENST00000396366 ZSCAN10Q96SZ4 725 aaPredicted RBP21.5■■□□□ 1.03
FXN-203ENST00000396366 LBHD1Q9BQE6 289 aaPredicted RBP21.5■■□□□ 1.03
FXN-203ENST00000396366 UBA5Q9GZZ9 404 aa21.5■■□□□ 1.03
FXN-203ENST00000396366 PRKAG2Q9UGJ0 569 aa21.5■■□□□ 1.03
FXN-203ENST00000396366 TRIM43BA6NCK2 446 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 BAATQ14032 418 aaPredicted RBP21.49■■□□□ 1.03
FXN-203ENST00000396366 TMEM63BQ5T3F8 832 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 EEPD1Q7L9B9 569 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 TRIM43Q96BQ3 446 aaPredicted RBP21.49■■□□□ 1.03
FXN-203ENST00000396366 TSEN34Q9BSV6 310 aaKnown RBP21.49■■□□□ 1.03
FXN-203ENST00000396366 PDLIM7Q9NR12 457 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 PDGFCQ9NRA1 345 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 CTNNA3Q9UI47 895 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 LTBP2Q14767 1821 aa21.49■■□□□ 1.03
FXN-203ENST00000396366 ASB14A6NK59 587 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 C6orf222P0C671 652 aaPredicted RBP21.48■■□□□ 1.03
FXN-203ENST00000396366 CHMLP26374 656 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 PTH1RQ03431 593 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 IQCA1Q86XH1 822 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 ENAHQ8N8S7 591 aaPredicted RBP21.48■■□□□ 1.03
FXN-203ENST00000396366 PNMA1Q8ND90 353 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 CLEC4DQ8WXI8 215 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 ANKS1AQ92625 1134 aa21.48■■□□□ 1.03
FXN-203ENST00000396366 CTAGE5O15320 804 aa21.47■■□□□ 1.03
FXN-203ENST00000396366 PQBP1O60828 265 aaKnown RBP21.47■■□□□ 1.03
FXN-203ENST00000396366 ITGB8P26012 769 aa21.47■■□□□ 1.03
FXN-203ENST00000396366 GJA9P57773 515 aa21.47■■□□□ 1.03
FXN-203ENST00000396366 LRIT3Q3SXY7 679 aa21.47■■□□□ 1.03
FXN-203ENST00000396366 BADQ92934 168 aa21.47■■□□□ 1.03
FXN-203ENST00000396366 UPF3AQ9H1J1 476 aaKnown RBP21.47■■□□□ 1.03
FXN-203ENST00000396366 KAT14Q9H8E8 782 aa21.47■■□□□ 1.03
FXN-203ENST00000396366 LAMA2P24043 3122 aaKnown RBP21.46■■□□□ 1.03
FXN-203ENST00000396366 PTPDC1A2A3K4 754 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 ASGR1P07306 291 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 BEX3Q00994 111 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 TNFAIP2Q03169 654 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 TAPT1Q6NXT6 567 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 SLC30A10Q6XR72 485 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 FBXO16Q8IX29 292 aaPredicted RBP21.46■■□□□ 1.03
FXN-203ENST00000396366 STARD7Q9NQZ5 370 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 TNKSO95271 1327 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 LRRC37A2A6NM11 1700 aa21.46■■□□□ 1.03
FXN-203ENST00000396366 MOXD2PA6NHM9 499 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 SMPD1P17405 629 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 CALML3P27482 149 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 CST5P28325 142 aaPredicted RBP21.45■■□□□ 1.02
FXN-203ENST00000396366 CCDC178Q5BJE1 867 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 GNASQ5JWF2 1037 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
FXN-203ENST00000396366 CYB5R4Q7L1T6 521 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 KRT23Q9C075 422 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 TAF6LQ9Y6J9 622 aa21.45■■□□□ 1.02
FXN-203ENST00000396366 CLTBP09497 229 aa21.44■■□□□ 1.02
FXN-203ENST00000396366 USH1GQ495M9 461 aa21.44■■□□□ 1.02
FXN-203ENST00000396366 GPATCH4Q5T3I0 446 aaKnown RBP21.44■■□□□ 1.02
FXN-203ENST00000396366 NUP133Q8WUM0 1156 aa21.44■■□□□ 1.02
FXN-203ENST00000396366 SPC25Q9HBM1 224 aa21.44■■□□□ 1.02
FXN-203ENST00000396366 GNEQ9Y223 722 aaKnown RBP21.44■■□□□ 1.02
FXN-203ENST00000396366 ALDH5A1P51649 535 aaPredicted RBP21.43■■□□□ 1.02
FXN-203ENST00000396366 FAAP100Q0VG06 881 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 RNF207Q6ZRF8 634 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 Q7L0L9 218 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 PCSK9Q8NBP7 692 aaKnown RBP21.43■■□□□ 1.02
FXN-203ENST00000396366 MORC4Q8TE76 937 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 VTI1AQ96AJ9 217 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 CNNM2Q9H8M5 875 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 VAT1LQ9HCJ6 419 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 RAD50Q92878 1312 aa21.43■■□□□ 1.02
FXN-203ENST00000396366 DYNC1LI2O43237 492 aaPredicted RBP21.42■■□□□ 1.02
FXN-203ENST00000396366 CYP21A2P08686 494 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 NT5C2P49902 561 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 RPS6P62753 249 aaKnown RBP21.42■■□□□ 1.02
FXN-203ENST00000396366 SEC23AQ15436 765 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 SHHQ15465 462 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 C9orf50Q5SZB4 431 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 ANKRD33Q7Z3H0 272 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 WDR19Q8NEZ3 1342 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 RUFY2Q8WXA3 655 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 TBC1D5Q92609 795 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 GLT1D1Q96MS3 346 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 UBAC1Q9BSL1 405 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 TMEM39AQ9NV64 488 aa21.42■■□□□ 1.02
FXN-203ENST00000396366 KIAA0355O15063 1070 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 SGSM2O43147 1006 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 NKX3-2P78367 333 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 CDC37Q16543 378 aaPredicted RBP21.41■■□□□ 1.02
FXN-203ENST00000396366 IQSEC1Q6DN90 963 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 KIAA1211Q6ZU35 1233 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 TLK2Q86UE8 772 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms