RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 AHCYL1O43865 530 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 JAK2O60674 1132 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 OATP04181 439 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 TMED1Q13445 227 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 DRP2Q13474 957 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 SPA17Q15506 151 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 TRIM65Q6PJ69 517 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 RALYLQ86SE5 291 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 ANKZF1Q9H8Y5 726 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 AOX1Q06278 1338 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 SOWAHDA6NJG2 315 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 ZFYP08048 801 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 NPR1P16066 1061 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
RAPGEF3-202ENST00000395358 STXBP3O00186 592 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 KRT86O43790 486 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 ATP6V1G1O75348 118 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 LDHCP07864 332 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 GRAPQ13588 217 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 C8orf74Q6P047 294 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 FGD4Q96M96 766 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 LRRC2Q9BYS8 371 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 SPTLC2O15270 562 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 ROR2Q01974 943 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 MAP7Q14244 749 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 DRAXINQ8NBI3 349 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 NOA1Q8NC60 698 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 CCDC43Q96MW1 224 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 ZFATQ9P243 1243 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 MYZAPP0CAP1 466 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 RAB27AP51159 221 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 PSMB7Q99436 277 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 DENND2AQ9ULE3 1009 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
RAPGEF3-202ENST00000395358 ATP2B4P23634 1241 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 UBE4AQ14139 1066 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 PLCB4Q15147 1175 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 EPN3Q9H201 632 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 ERICH2A1L162 156 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 PPP1R37O75864 691 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 LSP1P33241 339 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 PRPF4BQ13523 1007 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 FUKQ8N0W3 1084 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 PROCA1Q8NCQ7 364 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 MASTLQ96GX5 879 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 USP28Q96RU2 1077 aa12.52□□□□□ -0.4
RAPGEF3-202ENST00000395358 MACROD2A1Z1Q3 448 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 TMEM232C9JQI7 657 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 USO1O60763 962 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 RTN3O95197 1032 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 SCNN1BP51168 640 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 STX17P56962 302 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 MRPS25P82663 173 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 KRT32Q14532 448 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 CACNA2D4Q7Z3S7 1137 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 GBP7Q8N8V2 638 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 CCDC197Q8NCU1 140 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 HDLBPQ00341 1268 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 PPFIBP2Q8ND30 876 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 JDP2Q8WYK2 163 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 L3MBTL1Q9Y468 752 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
RAPGEF3-202ENST00000395358 TLDC2A0PJX2 215 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 BACH1O14867 736 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 SASH1O94885 1247 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 CSF1RP07333 972 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 ATP5JP18859 108 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 SESN3P58005 492 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 BZW1Q7L1Q6 419 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 KLHL29Q96CT2 875 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 XDHP47989 1333 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 PYGBP11216 843 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
RAPGEF3-202ENST00000395358 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms