RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DDX11Q96FC9 970 aa23.14■■□□□ 1.29
SNCA-203ENST00000394986 A1CFQ9NQ94 594 aaKnown RBP23.14■■□□□ 1.29
SNCA-203ENST00000394986 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.29
SNCA-203ENST00000394986 CENPFP49454 3210 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 CAPN15O75808 1086 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 HMGCRP04035 888 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 RTN1Q16799 776 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 NSMFQ6X4W1 530 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 FBXO11Q86XK2 927 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 CCDC82Q8N4S0 544 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 CLEC4DQ8WXI8 215 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 IL17RAQ96F46 866 aa23.13■■□□□ 1.29
SNCA-203ENST00000394986 ZBTB5O15062 677 aa23.12■■□□□ 1.29
SNCA-203ENST00000394986 SPZ1Q9BXG8 430 aa23.12■■□□□ 1.29
SNCA-203ENST00000394986 DNAJC25-GNG10A0A024R161 153 aa23.11■■□□□ 1.29
SNCA-203ENST00000394986 hCG_1642624A0A1W2PR95 340 aa23.11■■□□□ 1.29
SNCA-203ENST00000394986 CDC27P30260 824 aa23.11■■□□□ 1.29
SNCA-203ENST00000394986 GNAQP50148 359 aa23.11■■□□□ 1.29
SNCA-203ENST00000394986 ZNF792Q3KQV3 632 aa23.11■■□□□ 1.29
SNCA-203ENST00000394986 MAML3Q96JK9 1138 aa23.11■■□□□ 1.29
SNCA-203ENST00000394986 FAM217BQ9NTX9 383 aaPredicted RBP23.11■■□□□ 1.29
SNCA-203ENST00000394986 CYP2C19P33261 490 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 METAP2P50579 478 aaKnown RBP eCLIP23.1■■□□□ 1.29
SNCA-203ENST00000394986 UBXN2AP68543 259 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 CNTN2Q02246 1040 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 LZTS2Q9BRK4 669 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 C22orf23Q9BZE7 217 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 UNC93B1Q9H1C4 597 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 RBM28Q9NW13 759 aaKnown RBP23.1■■□□□ 1.29
SNCA-203ENST00000394986 SLC5A4Q9NY91 659 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 CYP39A1Q9NYL5 469 aa23.1■■□□□ 1.29
SNCA-203ENST00000394986 CCL5P13501 91 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 PRKAR2AP13861 404 aaKnown RBP23.09■■□□□ 1.29
SNCA-203ENST00000394986 ADD1P35611 737 aaKnown RBP23.09■■□□□ 1.29
SNCA-203ENST00000394986 SOX10P56693 466 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 SLC30A10Q6XR72 485 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 TRMT44Q8IYL2 757 aaKnown RBP23.09■■□□□ 1.29
SNCA-203ENST00000394986 FGD4Q96M96 766 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 PURBQ96QR8 312 aaKnown RBP23.09■■□□□ 1.29
SNCA-203ENST00000394986 AMNQ9BXJ7 453 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 PNMA2Q9UL42 364 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 ABCB11O95342 1321 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 SMCHD1A6NHR9 2005 aa23.09■■□□□ 1.29
SNCA-203ENST00000394986 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 PTPDC1A2A3K4 754 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 POTEB2H3BUK9 544 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 PDIA3P30101 505 aaKnown RBP23.08■■□□□ 1.29
SNCA-203ENST00000394986 RCAN1P53805 252 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 CACNB2Q08289 660 aaPredicted RBP23.08■■□□□ 1.29
SNCA-203ENST00000394986 BAATQ14032 418 aaPredicted RBP23.08■■□□□ 1.29
SNCA-203ENST00000394986 RRP36Q96EU6 259 aaKnown RBP23.08■■□□□ 1.29
SNCA-203ENST00000394986 PCDHA1Q9Y5I3 950 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 PFASO15067 1338 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 CNTNAP5Q8WYK1 1306 aa23.08■■□□□ 1.29
SNCA-203ENST00000394986 IGHA2P01877 340 aa23.08■■□□□ 1.28
SNCA-203ENST00000394986 EVCP57679 992 aa23.08■■□□□ 1.28
SNCA-203ENST00000394986 CCT2P78371 535 aaKnown RBP23.08■■□□□ 1.28
SNCA-203ENST00000394986 MFSD14CQ5VZR4 134 aa23.08■■□□□ 1.28
SNCA-203ENST00000394986 OLFML2BQ68BL8 750 aa23.08■■□□□ 1.28
SNCA-203ENST00000394986 FAM133AQ8N9E0 248 aa23.08■■□□□ 1.28
SNCA-203ENST00000394986 TBC1D5Q92609 795 aa23.08■■□□□ 1.28
SNCA-203ENST00000394986 NCOA5Q9HCD5 579 aaKnown RBP23.08■■□□□ 1.28
SNCA-203ENST00000394986 SMARCA1P28370 1054 aa23.07■■□□□ 1.28
SNCA-203ENST00000394986 FUT2Q10981 343 aa23.07■■□□□ 1.28
SNCA-203ENST00000394986 MAP3K21Q5TCX8 1036 aa23.07■■□□□ 1.28
SNCA-203ENST00000394986 NOL8Q76FK4 1167 aaKnown RBP23.07■■□□□ 1.28
SNCA-203ENST00000394986 KIF2CQ99661 725 aa23.07■■□□□ 1.28
SNCA-203ENST00000394986 DIS3Q9Y2L1 958 aaKnown RBP23.07■■□□□ 1.28
SNCA-203ENST00000394986 DDX49Q9Y6V7 483 aaKnown RBP23.07■■□□□ 1.28
SNCA-203ENST00000394986 ASTN1O14525 1302 aa23.07■■□□□ 1.28
SNCA-203ENST00000394986 NID2Q14112 1375 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 BAZ2BQ9UIF8 2168 aaKnown RBP23.06■■□□□ 1.28
SNCA-203ENST00000394986 SOWAHBA6NEL2 793 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 OPLAHO14841 1288 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 PPFIA3O75145 1194 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 CALML3P27482 149 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 NEK4P51957 841 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 AK2P54819 239 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 STK3Q13188 491 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 RNF207Q6ZRF8 634 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 RNF208Q9H0X6 261 aa23.06■■□□□ 1.28
SNCA-203ENST00000394986 SEC63Q9UGP8 760 aaKnown RBP23.06■■□□□ 1.28
SNCA-203ENST00000394986 MRPL11Q9Y3B7 192 aaKnown RBP23.06■■□□□ 1.28
SNCA-203ENST00000394986 POTEFA5A3E0 1075 aa23.05■■□□□ 1.28
SNCA-203ENST00000394986 CCND3P30281 292 aaPredicted RBP23.05■■□□□ 1.28
SNCA-203ENST00000394986 RBM25P49756 843 aaKnown RBP23.05■■□□□ 1.28
SNCA-203ENST00000394986 RPS6P62753 249 aaKnown RBP23.05■■□□□ 1.28
SNCA-203ENST00000394986 PRAMEF19Q5SWL8 479 aa23.05■■□□□ 1.28
SNCA-203ENST00000394986 TRPV1Q8NER1 839 aa23.05■■□□□ 1.28
SNCA-203ENST00000394986 TINF2Q9BSI4 451 aa23.05■■□□□ 1.28
SNCA-203ENST00000394986 RPTORQ8N122 1335 aa23.04■■□□□ 1.28
SNCA-203ENST00000394986 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.28
SNCA-203ENST00000394986 UPF2Q9HAU5 1272 aaKnown RBP23.04■■□□□ 1.28
SNCA-203ENST00000394986 TPCN1Q9ULQ1 816 aa23.04■■□□□ 1.28
SNCA-203ENST00000394986 CFBP00751 764 aa23.03■■□□□ 1.28
SNCA-203ENST00000394986 GPKOWQ92917 476 aaPredicted RBP eCLIP23.03■■□□□ 1.28
SNCA-203ENST00000394986 ZNF274Q96GC6 653 aaPredicted RBP23.03■■□□□ 1.28
SNCA-203ENST00000394986 TMEM106CQ9BVX2 250 aa23.03■■□□□ 1.28
SNCA-203ENST00000394986 BACH2Q9BYV9 841 aa23.03■■□□□ 1.28
SNCA-203ENST00000394986 ALDH8A1Q9H2A2 487 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms