RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 IGSF3O75054 1194 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 FCER1AP12319 257 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 MORC3Q14149 939 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 APOBEC3HQ6NTF7 200 aaKnown RBP17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 TPH2Q8IWU9 490 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 LZTS2Q9BRK4 669 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 TBC1D8BQ0IIM8 1120 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 ACER1Q8TDN7 264 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 TIGD1Q96MW7 591 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 MYO5AQ9Y4I1 1855 aaKnown RBP17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 CASP14P31944 242 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 KRT9P35527 623 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 ATP2C1P98194 919 aaPredicted RBP17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 GLIPR1L2Q4G1C9 344 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 CDAN1Q8IWY9 1227 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 RDH13Q8NBN7 331 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 DISC1Q9NRI5 854 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 GUCA1BQ9UMX6 200 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 CD44P16070 742 aaKnown RBP17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 BMP6P22004 513 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 PRCPP42785 496 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 SAMD7Q7Z3H4 446 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 ARHGEF10LQ9HCE6 1279 aa17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 SEPT11Q9NVA2 429 aaKnown RBP17.82■□□□□ 0.44
SMARCD1-202ENST00000394963 KMT5BQ4FZB7 885 aa17.81■□□□□ 0.44
SMARCD1-202ENST00000394963 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
SMARCD1-202ENST00000394963 BMP3P12645 472 aa17.81■□□□□ 0.44
SMARCD1-202ENST00000394963 ASPRV1Q53RT3 343 aa17.81■□□□□ 0.44
SMARCD1-202ENST00000394963 TMC4Q7Z404 712 aa17.81■□□□□ 0.44
SMARCD1-202ENST00000394963 PDCL2Q8N4E4 241 aa17.81■□□□□ 0.44
SMARCD1-202ENST00000394963 KCNJ18B7U540 433 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 ACTN4O43707 911 aaKnown RBP17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 KCNJ12Q14500 433 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 ARMCX5Q6P1M9 558 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 NOC4LQ9BVI4 516 aaKnown RBP17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 AKR1B15C9JRZ8 316 aaPredicted RBP17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 FUT2Q10981 343 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 MTF1Q14872 753 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 PSMB7Q99436 277 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 PUF60Q9UHX1 559 aaKnown RBP17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 PTPROQ16827 1216 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 FKBP15Q5T1M5 1219 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 CERS3Q8IU89 383 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 NLRC4Q9NPP4 1024 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 HPSEQ9Y251 543 aa17.8■□□□□ 0.44
SMARCD1-202ENST00000394963 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 SHTN1A0MZ66 631 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 PALM3A6NDB9 673 aaPredicted RBP17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 E9PMD0 336 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 SLC37A4O43826 429 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 HOXA10P31260 410 aaPredicted RBP17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 LONP1P36776 959 aaKnown RBP17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 SOWAHDA6NJG2 315 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 B4DLN1 442 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 GTPBP6O43824 516 aaPredicted RBP17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 RBL2Q08999 1139 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 ZNF543Q08ER8 600 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 ZNF408Q9H9D4 720 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 PNMA6FA0A0J9YX94 578 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 NDUFB10O96000 172 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 DCAF17Q5H9S7 520 aaPredicted RBP17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 SPATA1Q5VX52 437 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 COL16A1Q07092 1604 aaPredicted RBP17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
SMARCD1-202ENST00000394963 ZSCAN12O43309 604 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 CASQ1P31415 396 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 SHMT1P34896 483 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 DGKZQ13574 1117 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 GPATCH4Q5T3I0 446 aaKnown RBP17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 PIGOQ8TEQ8 1089 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 UBXN4Q92575 508 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 AMNQ9BXJ7 453 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 IRX2Q9BZI1 471 aaPredicted RBP17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 ZBTB5O15062 677 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 CCDC17Q96LX7 622 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 SWAP70Q9UH65 585 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 AHDC1Q5TGY3 1603 aaPredicted RBP17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 ATRNO75882 1429 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 FLOT1O75955 427 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 MATR3P43243 847 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 PPP4R3BQ5MIZ7 849 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 RBM43Q6ZSC3 357 aaKnown RBP17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
SMARCD1-202ENST00000394963 POTEB3A0JP26 581 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 POTECB2RU33 542 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 ZNF569Q5MCW4 686 aa17.77■□□□□ 0.44
SMARCD1-202ENST00000394963 POTEBQ6S5H4 581 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms