RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 TSPY8P0CW00 308 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 TDO2P48775 406 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 CCDC96Q2M329 555 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 CLEC10AQ8IUN9 316 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 MTMR8Q96EF0 704 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 AGBL1Q96MI9 1066 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 MTA3Q9BTC8 594 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 PRR12Q9ULL5 1215 aa7.38□□□□□ -1.23
SMARCAD1-203ENST00000394961 KIAA1671Q9BY89 1806 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 SMIM22K7EJ46 135 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 ASGR1P07306 291 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 EPHB4P54760 987 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 GPATCH4Q5T3I0 446 aaKnown RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 C16orf59Q7L2K0 433 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 CLEC4DQ8WXI8 215 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 VWCEQ96DN2 955 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 NOC4LQ9BVI4 516 aaKnown RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 NAPBQ9H115 298 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 RNF146Q9NTX7 359 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 TMEM39AQ9NV64 488 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 ABCB11O95342 1321 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 PGK2P07205 417 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 SUPT20HL2P0C7V6 817 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 PRAMEF19Q5SWL8 479 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 CCDC144CPQ8IYA2 1237 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 RPUSD2Q8IZ73 545 aaKnown RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 SPICE1Q8N0Z3 855 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 MAFAQ8NHW3 353 aaPredicted RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 DDX11Q96FC9 970 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 IWS1Q96ST2 819 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 MYH7BA7E2Y1 1941 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 GRIN2DO15399 1336 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 A6NJR5 290 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 HIP1O00291 1037 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 RAG1P15918 1043 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 HOXC8P31273 242 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 CPT1AP50416 773 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 ALDH5A1P51649 535 aaPredicted RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 TFAP4Q01664 338 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 TNFAIP2Q03169 654 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 MKRN4PQ13434 485 aaPredicted RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 PLS1Q14651 629 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 C20orf194Q5TEA3 1177 aa7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 RNPC3Q96LT9 517 aaKnown RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 COL25A1Q9BXS0 654 aaPredicted RBP7.37□□□□□ -1.23
SMARCAD1-203ENST00000394961 RAD50Q92878 1312 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 CAND2O75155 1236 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 MCMDC2Q4G0Z9 681 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 WDR78Q5VTH9 848 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 TRERF1Q96PN7 1200 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 SLC9A7Q96T83 725 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 MAP3K14Q99558 947 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 RNF41Q9H4P4 317 aaPredicted RBP7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 PCDHB15Q9Y5E8 787 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 MYADML2A6NDP7 307 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 RRP1P56182 461 aaKnown RBP7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 ZNF543Q08ER8 600 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 SLFNL1Q499Z3 407 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 SYDE2Q5VT97 1194 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 Q7L0L9 218 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 ANKRD35Q8N283 1001 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 DSCC1Q9BVC3 393 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 RAVER2Q9HCJ3 691 aaKnown RBP7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 ECM2O94769 699 aaPredicted RBP7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 CXCL10P02778 98 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 SMPD1P17405 629 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 PDE1AP54750 535 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 FSCN1Q16658 493 aaKnown RBP7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 TLK2Q86UE8 772 aa7.36□□□□□ -1.23
SMARCAD1-203ENST00000394961 CCDC171Q6TFL3 1326 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 SMARCA5O60264 1052 aaPredicted RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 EFCAB14O75071 495 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 PGK1P00558 417 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 PDHBP11177 359 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 SLC1A4P43007 532 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 PURAQ00577 322 aaKnown RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 TRAF1Q13077 416 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 LRRC47Q8N1G4 583 aaKnown RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 MTG1Q9BT17 334 aaPredicted RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 CXXC1Q9P0U4 656 aaPredicted RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 TMEM232C9JQI7 657 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 HAS3O00219 553 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 CHGBP05060 677 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 SMARCA1P28370 1054 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 ITGA7Q13683 1181 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 ASPRV1Q53RT3 343 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 TJAP1Q5JTD0 557 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 CCDC62Q6P9F0 684 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 KCNV1Q6PIU1 500 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 CCDC155Q8N6L0 562 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 TIFAQ96CG3 184 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.231e-10■■■□□ 16
SMARCAD1-203ENST00000394961 AP5M1Q9H0R1 490 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 DNAJB2P25686 324 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 NUP88Q99567 741 aaPredicted RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 FSD1Q9BTV5 496 aa7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 CTDP1Q9Y5B0 961 aaPredicted RBP7.35□□□□□ -1.23
SMARCAD1-203ENST00000394961 LOXHD1Q8IVV2 1947 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 STAM2O75886 525 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms