RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TJAP1Q5JTD0 557 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 GMCL1Q96IK5 515 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 TRERF1Q96PN7 1200 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 PRDM12Q9H4Q4 367 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 IL23AQ9NPF7 189 aa25.09■■□□□ 1.61
TRAF4-203ENST00000394925 DDX49Q9Y6V7 483 aaKnown RBP25.09■■□□□ 1.61
TRAF4-203ENST00000394925 PTGS1P23219 599 aa25.08■■□□□ 1.61
TRAF4-203ENST00000394925 SNAP25P60880 206 aa25.08■■□□□ 1.61
TRAF4-203ENST00000394925 TLK2Q86UE8 772 aa25.08■■□□□ 1.61
TRAF4-203ENST00000394925 AP5M1Q9H0R1 490 aa25.08■■□□□ 1.61
TRAF4-203ENST00000394925 GNEQ9Y223 722 aaKnown RBP25.08■■□□□ 1.61
TRAF4-203ENST00000394925 DYNC1LI2O43237 492 aaPredicted RBP25.07■■□□□ 1.6
TRAF4-203ENST00000394925 FSCN1Q16658 493 aaKnown RBP25.07■■□□□ 1.6
TRAF4-203ENST00000394925 TKFCQ3LXA3 575 aa25.07■■□□□ 1.6
TRAF4-203ENST00000394925 KCTD1Q719H9 257 aa25.07■■□□□ 1.6
TRAF4-203ENST00000394925 SLC43A3Q8NBI5 491 aa25.07■■□□□ 1.6
TRAF4-203ENST00000394925 HIPK3Q9H422 1215 aa25.07■■□□□ 1.6
TRAF4-203ENST00000394925 STX8Q9UNK0 236 aa25.07■■□□□ 1.6
TRAF4-203ENST00000394925 CABYRO75952 493 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 SMPD1P17405 629 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 ITGA7Q13683 1181 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 EEPD1Q7L9B9 569 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 HERVK_113Q902F9 699 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 FSD1Q9BTV5 496 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 PDGFCQ9NRA1 345 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 CXXC1Q9P0U4 656 aaPredicted RBP25.06■■□□□ 1.6
TRAF4-203ENST00000394925 MSRAQ9UJ68 235 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 UMODL1Q5DID0 1318 aa25.06■■□□□ 1.6
TRAF4-203ENST00000394925 FGBP02675 491 aa25.05■■□□□ 1.6
TRAF4-203ENST00000394925 MUM1L1Q5H9M0 696 aa25.05■■□□□ 1.6
TRAF4-203ENST00000394925 GRIN2DO15399 1336 aa25.05■■□□□ 1.6
TRAF4-203ENST00000394925 TTC41PQ6P2S7 1318 aa25.05■■□□□ 1.6
TRAF4-203ENST00000394925 MUC3AQ02505 3323 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 LRRC37A2A6NM11 1700 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 TSPY2A6NKD2 308 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 ERC2O15083 957 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 ZEB2O60315 1214 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 PLA2G6O60733 806 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 CCL23P55773 120 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 RAB30Q15771 203 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 ZMYM1Q5SVZ6 1142 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 IQSEC1Q6DN90 963 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 RCSD1Q6JBY9 416 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 RASGRP2Q7LDG7 609 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 OTOP2Q7RTS6 562 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 FBXO16Q8IX29 292 aaPredicted RBP25.04■■□□□ 1.6
TRAF4-203ENST00000394925 PI4K2BQ8TCG2 481 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 TRPV6Q9H1D0 765 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 MTIF3Q9H2K0 278 aaKnown RBP25.04■■□□□ 1.6
TRAF4-203ENST00000394925 INCENPQ9NQS7 918 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 CYP39A1Q9NYL5 469 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 PRR12Q9ULL5 1215 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 MTMR7Q9Y216 660 aa25.04■■□□□ 1.6
TRAF4-203ENST00000394925 GBF1Q92538 1859 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 NMT2O60551 498 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 CTDSPL2Q05D32 466 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 PPP4R3BQ5MIZ7 849 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 AKNAD1Q5T1N1 836 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 TMEM63BQ5T3F8 832 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 TAPT1Q6NXT6 567 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 NSMFQ6X4W1 530 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 NKX2-4Q9H2Z4 354 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 IL17RBQ9NRM6 502 aa25.03■■□□□ 1.6
TRAF4-203ENST00000394925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.03■■□□□ 1.6
TRAF4-203ENST00000394925 CHD7Q9P2D1 2997 aa25.02■■□□□ 1.6
TRAF4-203ENST00000394925 PSMC6P62333 389 aa25.02■■□□□ 1.6
TRAF4-203ENST00000394925 ADGRE1Q14246 886 aa25.02■■□□□ 1.6
TRAF4-203ENST00000394925 OTUD7AQ8TE49 926 aaPredicted RBP25.02■■□□□ 1.6
TRAF4-203ENST00000394925 PURBQ96QR8 312 aaKnown RBP25.02■■□□□ 1.6
TRAF4-203ENST00000394925 NOC4LQ9BVI4 516 aaKnown RBP25.02■■□□□ 1.6
TRAF4-203ENST00000394925 CCPG1Q9ULG6 757 aa25.02■■□□□ 1.6
TRAF4-203ENST00000394925 TNFRSF10AO00220 468 aa25.01■■□□□ 1.59
TRAF4-203ENST00000394925 B4GALT4O60513 344 aa25.01■■□□□ 1.59
TRAF4-203ENST00000394925 IGFBP4P22692 258 aa25.01■■□□□ 1.59
TRAF4-203ENST00000394925 CCDC85BQ15834 202 aaPredicted RBP25.01■■□□□ 1.59
TRAF4-203ENST00000394925 SLC28A3Q9HAS3 691 aa25.01■■□□□ 1.59
TRAF4-203ENST00000394925 Q9Y3F1 56 aa25.01■■□□□ 1.59
TRAF4-203ENST00000394925 LCTP09848 1927 aa25■■□□□ 1.59
TRAF4-203ENST00000394925 KIAA1211Q6ZU35 1233 aa25■■□□□ 1.59
TRAF4-203ENST00000394925 ATXN2LQ8WWM7 1075 aaKnown RBP25■■□□□ 1.59
TRAF4-203ENST00000394925 SEZ6LQ9BYH1 1024 aa25■■□□□ 1.59
TRAF4-203ENST00000394925 WNT8AQ9H1J5 351 aa25■■□□□ 1.59
TRAF4-203ENST00000394925 VTA1Q9NP79 307 aa25■■□□□ 1.59
TRAF4-203ENST00000394925 YBX2Q9Y2T7 364 aaKnown RBP25■■□□□ 1.59
TRAF4-203ENST00000394925 FOXP2O15409 715 aa24.99■■□□□ 1.59
TRAF4-203ENST00000394925 RANBP6O60518 1105 aaKnown RBP24.99■■□□□ 1.59
TRAF4-203ENST00000394925 CCDC96Q2M329 555 aa24.99■■□□□ 1.59
TRAF4-203ENST00000394925 THEGQ9P2T0 379 aa24.99■■□□□ 1.59
TRAF4-203ENST00000394925 RABGGTBP53611 331 aa24.98■■□□□ 1.59
TRAF4-203ENST00000394925 RPUSD2Q8IZ73 545 aaKnown RBP24.98■■□□□ 1.59
TRAF4-203ENST00000394925 SCLYQ96I15 445 aa24.98■■□□□ 1.59
TRAF4-203ENST00000394925 NCOR1O75376 2440 aa24.98■■□□□ 1.59
TRAF4-203ENST00000394925 ICAM1P05362 532 aa24.97■■□□□ 1.59
TRAF4-203ENST00000394925 SLC16A2P36021 539 aa24.97■■□□□ 1.59
TRAF4-203ENST00000394925 BAATQ14032 418 aaPredicted RBP24.97■■□□□ 1.59
TRAF4-203ENST00000394925 TTBK2Q6IQ55 1244 aa24.97■■□□□ 1.59
TRAF4-203ENST00000394925 MORC4Q8TE76 937 aa24.97■■□□□ 1.59
TRAF4-203ENST00000394925 ASB2Q96Q27 587 aa24.97■■□□□ 1.59
TRAF4-203ENST00000394925 SLC4A7Q9Y6M7 1214 aa24.97■■□□□ 1.59
TRAF4-203ENST00000394925 DCAF4Q8WV16 495 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms