RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NUB1Q9Y5A7 615 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 FAM135BQ49AJ0 1406 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 RILPQ96NA2 401 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 VCX3BQ9H321 246 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 RIC8AQ9NPQ8 531 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 KCNK3O14649 394 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 PHBP35232 272 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 POLR2FP61218 127 aaKnown RBP11.39□□□□□ -0.59
COL4A6-203ENST00000394872 UBE3CQ15386 1083 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 NUF2Q9BZD4 464 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 XPO4Q9C0E2 1151 aaKnown RBP11.39□□□□□ -0.59
COL4A6-203ENST00000394872 ZBTB1Q9Y2K1 713 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 XPOTO43592 962 aaKnown RBP11.39□□□□□ -0.59
COL4A6-203ENST00000394872 CIAO1O76071 339 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 CCND2P30279 289 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 MGARPQ8TDB4 240 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 CCDC51Q96ER9 411 aa11.39□□□□□ -0.59
COL4A6-203ENST00000394872 CSPG5O95196 566 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ADCY8P40145 1251 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 RPS6KA2Q15349 733 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ANKRD36BP1Q96IX9 119 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 BLMP54132 1417 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 BUB1O43683 1085 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ELF2Q15723 593 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 PTPROQ16827 1216 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 TPCN1Q9ULQ1 816 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 RAD17O75943 681 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 POLR2BP30876 1174 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 LONP1P36776 959 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ODR4Q5SWX8 454 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 GPATCH4Q5T3I0 446 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ARHGAP24Q8N264 748 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 METTL14Q9HCE5 456 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ADD3Q9UEY8 706 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 PFDN6O15212 129 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 DYNLL1P63167 89 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 MYL7Q01449 175 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
COL4A6-203ENST00000394872 PTGDRQ13258 359 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 NAA25Q14CX7 972 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 KAZNQ674X7 775 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 OR8K1Q8NGG5 319 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 SCYL1Q96KG9 808 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 CLIC6Q96NY7 704 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 PPP2R5AQ15172 486 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 RINT1Q6NUQ1 792 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 METTL23Q86XA0 190 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 C10orf67Q8IYJ2 551 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 PCDHB4Q9Y5E5 795 aa11.38□□□□□ -0.59
COL4A6-203ENST00000394872 A6NJR5 290 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 BTBD18B2RXH4 712 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 KRIT1O00522 736 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 KCNQ4P56696 695 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 NEO1Q92859 1461 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 ADGBQ8N7X0 1667 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 A6NNZ2 444 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 BBOX1O75936 387 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 TUBB8Q3ZCM7 444 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 SEC31BQ9NQW1 1179 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 M0R2C6 588 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 HNRNPDLO14979 420 aaKnown RBP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 PTPREP23469 700 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 FAM26FQ5R3K3 315 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 CC2D2BQ6DHV5 1058 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 ANKRD42Q8N9B4 389 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 TRIM58Q8NG06 486 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 PPP4R1Q8TF05 950 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 SKA2Q8WVK7 121 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 GJA10Q969M2 543 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 PALD1Q9ULE6 856 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 PCK1P35558 622 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 RNASELQ05823 741 aaKnown RBP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 SF3A3Q12874 501 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 AOC3Q16853 763 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 PRPSAP1Q14558 356 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
COL4A6-203ENST00000394872 CCDC68Q9H2F9 335 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 KIF9Q9HAQ2 790 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 SAR1BQ9Y6B6 198 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 ADGRL2O95490 1459 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
COL4A6-203ENST00000394872 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms