RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 CEP95Q96GE4 821 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 HOMER2Q9NSB8 354 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 COG6Q9Y2V7 657 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 STAT2P52630 851 aa23.47■■□□□ 1.35
UPK3B-203ENST00000394849 CNTN2Q02246 1040 aa23.47■■□□□ 1.35
UPK3B-203ENST00000394849 PPP4R3BQ5MIZ7 849 aa23.47■■□□□ 1.35
UPK3B-203ENST00000394849 FAM122AQ96E09 287 aa23.47■■□□□ 1.35
UPK3B-203ENST00000394849 A1CFQ9NQ94 594 aaKnown RBP23.47■■□□□ 1.35
UPK3B-203ENST00000394849 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.46■■□□□ 1.35
UPK3B-203ENST00000394849 ASTN1O14525 1302 aa23.46■■□□□ 1.35
UPK3B-203ENST00000394849 ZFYP08048 801 aaPredicted RBP23.46■■□□□ 1.35
UPK3B-203ENST00000394849 SUPT20HL2P0C7V6 817 aa23.46■■□□□ 1.35
UPK3B-203ENST00000394849 SLFN13Q68D06 897 aa23.46■■□□□ 1.35
UPK3B-203ENST00000394849 APPBP2Q92624 585 aa23.46■■□□□ 1.35
UPK3B-203ENST00000394849 LRRCC1Q9C099 1032 aa23.46■■□□□ 1.35
UPK3B-203ENST00000394849 PLIN4Q96Q06 1357 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 DYNC1LI2O43237 492 aaPredicted RBP23.45■■□□□ 1.34
UPK3B-203ENST00000394849 PLA2G6O60733 806 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 BMP1P13497 986 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 TDO2P48775 406 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 CCL23P55773 120 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 STK11IPQ8N1F8 1099 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 KBTBD3Q8NAB2 608 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 RNF146Q9NTX7 359 aa23.45■■□□□ 1.34
UPK3B-203ENST00000394849 GRIN2DO15399 1336 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 UMODL1Q5DID0 1318 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 SOWAHBA6NEL2 793 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 TMEM232C9JQI7 657 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 B4GALT4O60513 344 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 ATP2A2P16615 1042 aaKnown RBP23.44■■□□□ 1.34
UPK3B-203ENST00000394849 POU3F3P20264 500 aaPredicted RBP23.44■■□□□ 1.34
UPK3B-203ENST00000394849 PDE4BQ07343 736 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 NEDD1Q8NHV4 660 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 STAG1Q8WVM7 1258 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 GMCL1Q96IK5 515 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 TRPV6Q9H1D0 765 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 WNT8AQ9H1J5 351 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 ECHDC1Q9NTX5 307 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 REV3LO60673 3130 aa23.44■■□□□ 1.34
UPK3B-203ENST00000394849 GTPBP6O43824 516 aaPredicted RBP23.43■■□□□ 1.34
UPK3B-203ENST00000394849 SLC3A2P08195 630 aaKnown RBP23.43■■□□□ 1.34
UPK3B-203ENST00000394849 TSPY3P0CV98 308 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 TSPY8P0CW00 308 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 SMPD1P17405 629 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
UPK3B-203ENST00000394849 LRRC47Q8N1G4 583 aaKnown RBP23.43■■□□□ 1.34
UPK3B-203ENST00000394849 TRERF1Q96PN7 1200 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 NACAP1Q9BZK3 213 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 VTA1Q9NP79 307 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 ARIH1Q9Y4X5 557 aaPredicted RBP23.43■■□□□ 1.34
UPK3B-203ENST00000394849 XIRP2A4UGR9 3374 aa23.43■■□□□ 1.34
UPK3B-203ENST00000394849 TCF20Q9UGU0 1960 aaKnown RBP23.42■■□□□ 1.34
UPK3B-203ENST00000394849 ZBBXA8MT70 800 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 ERC2O15083 957 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 APPP05067 770 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 SLC1A4P43007 532 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 RABGGTBP53611 331 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 IKQ13123 557 aaPredicted RBP23.42■■□□□ 1.34
UPK3B-203ENST00000394849 TMEM67Q5HYA8 995 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 OSBP2Q969R2 916 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 GPATCH3Q96I76 525 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
UPK3B-203ENST00000394849 RAPGEFL1Q9UHV5 662 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 RCAN3Q9UKA8 241 aa23.42■■□□□ 1.34
UPK3B-203ENST00000394849 ISY1Q9ULR0 285 aaKnown RBP23.42■■□□□ 1.34
UPK3B-203ENST00000394849 ZNF536O15090 1300 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 LOC102724159A0A0B4J2E5 919 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 RNF113AO15541 343 aaKnown RBP23.41■■□□□ 1.34
UPK3B-203ENST00000394849 GPAA1O43292 621 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 PRDM1O75626 825 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 ACTN1P12814 892 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 PWP2Q15269 919 aaKnown RBP23.41■■□□□ 1.34
UPK3B-203ENST00000394849 TAPT1Q6NXT6 567 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 AGBL1Q96MI9 1066 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 COG5Q9UP83 839 aa23.41■■□□□ 1.34
UPK3B-203ENST00000394849 LRRC37A2A6NM11 1700 aa23.4■■□□□ 1.34
UPK3B-203ENST00000394849 PATL2C9JE40 543 aaKnown RBP23.4■■□□□ 1.34
UPK3B-203ENST00000394849 ALAS1P13196 640 aa23.4■■□□□ 1.34
UPK3B-203ENST00000394849 RFC2P35250 354 aa23.4■■□□□ 1.34
UPK3B-203ENST00000394849 MICALL1Q8N3F8 863 aa23.4■■□□□ 1.34
UPK3B-203ENST00000394849 PHOSPHO2Q8TCD6 241 aa23.4■■□□□ 1.34
UPK3B-203ENST00000394849 EPB41L4AQ9HCS5 686 aaPredicted RBP23.4■■□□□ 1.34
UPK3B-203ENST00000394849 CYP39A1Q9NYL5 469 aa23.4■■□□□ 1.34
UPK3B-203ENST00000394849 SKIV2LQ15477 1246 aaKnown RBP23.39■■□□□ 1.33
UPK3B-203ENST00000394849 DUSP28Q4G0W2 176 aa23.39■■□□□ 1.33
UPK3B-203ENST00000394849 MORC4Q8TE76 937 aa23.39■■□□□ 1.33
UPK3B-203ENST00000394849 ADD3Q9UEY8 706 aaKnown RBP23.39■■□□□ 1.33
UPK3B-203ENST00000394849 PRRC2BQ5JSZ5 2229 aaKnown RBP23.39■■□□□ 1.33
UPK3B-203ENST00000394849 CPT1AP50416 773 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 PSMC6P62333 389 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 RCSD1Q6JBY9 416 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 KIAA1211Q6ZU35 1233 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 IFNL3Q8IZI9 196 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 SCLYQ96I15 445 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 SLC9A7Q96T83 725 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 PDGFCQ9NRA1 345 aa23.38■■□□□ 1.33
UPK3B-203ENST00000394849 MYOGP15173 224 aa23.37■■□□□ 1.33
UPK3B-203ENST00000394849 TFAP4Q01664 338 aa23.37■■□□□ 1.33
UPK3B-203ENST00000394849 TFF2Q03403 129 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms