RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 MRPL40Q9NQ50 206 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 FARP1Q9Y4F1 1045 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 SRGAP2CP0DJJ0 459 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 CTNNA1P35221 906 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 LONRF2Q1L5Z9 754 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 RAPH1Q70E73 1250 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 A2MP01023 1474 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 GSTA4O15217 222 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 MAP3K7CLP57077 242 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 RNF207Q6ZRF8 634 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 ARMCX3Q9UH62 379 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 M0R2C6 588 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 ATF2P15336 505 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 NNMTP40261 264 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 GOLGA8JA6NMD2 632 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 POLR2DO15514 142 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 CLNS1AP54105 237 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 TPH2Q8IWU9 490 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 GOLGA8MH3BSY2 632 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 K7ENM7 598 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 FAM186BQ8IYM0 893 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 STX19Q8N4C7 294 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 NUDCD1Q96RS6 583 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 OLA1Q9NTK5 396 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 COPG1Q9Y678 874 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 MAP3K15Q6ZN16 1313 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 DDX39AO00148 427 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 IFNB1P01574 187 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 PMLP29590 882 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 MIS18BP1Q6P0N0 1132 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 NECAB1Q8N987 351 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 POLR3CQ9BUI4 534 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 OPHN1O60890 802 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 RPS6KB1P23443 525 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 ARL4AP40617 200 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 IDI1Q13907 227 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 C10orf76Q5T2E6 689 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 GADL1Q6ZQY3 521 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
SYNE2-205ENST00000394768 GIMAP8Q8ND71 665 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 DDX41Q9UJV9 622 aaKnown RBP8.1□□□□□ -1.11
SYNE2-205ENST00000394768 KRT39Q6A163 491 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 LRRC2Q9BYS8 371 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 TFCP2Q12800 502 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 BFSP1Q12934 665 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 GPATCH4Q5T3I0 446 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 TBC1D19Q8N5T2 526 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 PPWD1Q96BP3 646 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 VPS39Q96JC1 886 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DDX21Q9NR30 783 aaKnown RBP eCLIP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 A0A1B0GW55 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 APOEP02649 317 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4L2P0CJ85 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4L3P0CJ86 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4L4P0CJ87 422 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4L5P0CJ88 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4L6P0CJ89 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4L7P0CJ90 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 SERPINB6P35237 376 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 IL9RQ01113 521 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 PGBD1Q96JS3 809 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 GIMAP4Q9NUV9 329 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 DUX4Q9UBX2 424 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 SERPINB2P05120 415 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 GAP43P17677 238 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 TMTC3Q6ZXV5 915 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 ZC4H2Q9NQZ6 224 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 GOLGA8KD6RF30 607 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 MED21Q13503 144 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 KARSQ15046 597 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 CXorf38Q8TB03 319 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 PSTPIP2Q9H939 334 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 AATFQ9NY61 560 aaKnown RBP eCLIP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 MFAP3P55082 362 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 THOC5Q13769 683 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 GLE1Q53GS7 698 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 RNF139Q8WU17 664 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 NELFBQ8WX92 580 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 FAM96AQ9H5X1 160 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 WWC3Q9ULE0 1092 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 SRPRBQ9Y5M8 271 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 ABCC10Q5T3U5 1492 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 MYL1P05976 194 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 SCYL2Q6P3W7 929 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 LRRC8CQ8TDW0 803 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 MMTAG2Q9BU76 263 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 UPF3AQ9H1J1 476 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 GPBP1L1Q9HC44 474 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 MRPL47Q9HD33 250 aaKnown RBP8.09□□□□□ -1.11
SYNE2-205ENST00000394768 SAR1BQ9Y6B6 198 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 SMCO2A6NFE2 343 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 RASGRF2O14827 1237 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 PDE1BQ01064 536 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 MFSD14BQ5SR56 506 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 ATG16L1Q676U5 607 aa8.09□□□□□ -1.11
SYNE2-205ENST00000394768 KDRP35968 1356 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms