RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 TTC38Q5R3I4 469 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 INTS5Q6P9B9 1019 aaKnown RBP9.81□□□□□ -0.84
RTN4-206ENST00000394611 MAEAQ7L5Y9 396 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 HDAC7Q8WUI4 952 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 SPAG5Q96R06 1193 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 FAM167BQ9BTA0 163 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 LRRC1Q9BTT6 524 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 HYOU1Q9Y4L1 999 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 TTC26A0AVF1 554 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 FANCGO15287 622 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 GOLGA8HP0CJ92 632 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 SESN3P58005 492 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 RILPL1Q5EBL4 403 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 SPATA1Q5VX52 437 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 KANK3Q6NY19 840 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 AMIGO3Q86WK7 504 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 SMARCC2Q8TAQ2 1214 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 KAZALD1Q96I82 304 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 AP1M1Q9BXS5 423 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 ZSWIM5Q9P217 1185 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 LAMB4A4D0S4 1761 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 GJC1P36383 396 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 WHAMMP3Q1A5X7 153 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
RTN4-206ENST00000394611 HIBCHQ6NVY1 386 aaPredicted RBP9.8□□□□□ -0.84
RTN4-206ENST00000394611 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.8□□□□□ -0.84
RTN4-206ENST00000394611 NCAPGQ9BPX3 1015 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 KCNK9Q9NPC2 374 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 HEXIM1O94992 359 aaKnown RBP9.8□□□□□ -0.84
RTN4-206ENST00000394611 ZMYM1Q5SVZ6 1142 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 DSCC1Q9BVC3 393 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 MED4Q9NPJ6 270 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 CCDC87Q9NVE4 849 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 DNAJC17Q9NVM6 304 aaKnown RBP9.8□□□□□ -0.84
RTN4-206ENST00000394611 SUFUQ9UMX1 484 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 VPS41P49754 854 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 PLS1Q14651 629 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 DCAF17Q5H9S7 520 aaPredicted RBP9.8□□□□□ -0.84
RTN4-206ENST00000394611 ATL3Q6DD88 541 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 ANKRD42Q8N9B4 389 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 AGPAT5Q9NUQ2 364 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 TAF1LQ8IZX4 1826 aa9.8□□□□□ -0.84
RTN4-206ENST00000394611 GSTTP1A0A1W2PQM5 241 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 ITGA6P23229 1130 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
RTN4-206ENST00000394611 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 ARL8AQ96BM9 186 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 ENO4A6NNW6 628 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 KCNK3O14649 394 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 GNPATO15228 680 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 PLEKP08567 350 aaPredicted RBP9.79□□□□□ -0.84
RTN4-206ENST00000394611 CTNNA1P35221 906 aaKnown RBP9.79□□□□□ -0.84
RTN4-206ENST00000394611 TXKP42681 527 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 PPFIA1Q13136 1202 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 ABHD10Q9NUJ1 306 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 COL5A3P25940 1745 aaPredicted RBP9.79□□□□□ -0.84
RTN4-206ENST00000394611 NEDD4P46934 1319 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 UPP2O95045 317 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 MYBL2P10244 700 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 ABCB4P21439 1286 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 TMOD1P28289 359 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 DHX9Q08211 1270 aaKnown RBP9.79□□□□□ -0.84
RTN4-206ENST00000394611 TBC1D1Q86TI0 1168 aaPredicted RBP9.79□□□□□ -0.84
RTN4-206ENST00000394611 NLRP3Q96P20 1036 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 TCP11L1Q9NUJ3 509 aa9.79□□□□□ -0.84
RTN4-206ENST00000394611 GYPCP04921 128 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
RTN4-206ENST00000394611 LRP10Q7Z4F1 713 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 ZNF654Q8IZM8 581 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 DMGDHQ9UI17 866 aaKnown RBP9.78□□□□□ -0.84
RTN4-206ENST00000394611 TRAF5O00463 557 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 NMT2O60551 498 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 PARP1P09874 1014 aaKnown RBP9.78□□□□□ -0.84
RTN4-206ENST00000394611 BMP6P22004 513 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 IRAK1P51617 712 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 INF2Q27J81 1249 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 CCDC93Q567U6 631 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 AKNAD1Q5T1N1 836 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 OTUD6AQ7L8S5 288 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
RTN4-206ENST00000394611 L1RE1Q9UN81 338 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 BCS1LQ9Y276 419 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 PLEKHA8P1O95397 391 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 SPAG1Q07617 926 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 LRCH2Q5VUJ6 765 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 RBM43Q6ZSC3 357 aaKnown RBP9.78□□□□□ -0.84
RTN4-206ENST00000394611 DDX42Q86XP3 938 aaKnown RBP eCLIP9.78□□□□□ -0.849e-7■■□□□ 12.1
RTN4-206ENST00000394611 POTEDQ86YR6 584 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
RTN4-206ENST00000394611 C4BP0C0L5 1744 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 SMIM22K7EJ46 135 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 ERVK-24P63145 666 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 TBC1D10BQ4KMP7 808 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms