RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 FAM207AQ9NSI2 230 aaPredicted RBP18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 STIM2Q9P246 746 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 UBA7P41226 1012 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 EPHB4P54760 987 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 TMTC3Q6ZXV5 915 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 ZIM3Q96PE6 472 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 PCDHA13Q9Y5I0 950 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
EFEMP1-202ENST00000394555 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 PDE8AO60658 829 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 GUCY1A3Q02108 690 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 NAALADL2Q58DX5 795 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 SWT1Q5T5J6 900 aaKnown RBP18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 TTI2Q6NXR4 508 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 C8orf74Q6P047 294 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 MS4A14Q96JA4 679 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 NUP58Q9BVL2 599 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.52
EFEMP1-202ENST00000394555 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 AKR1B10O60218 316 aa18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 SCG2P13521 617 aa18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 RNF187Q5TA31 235 aaPredicted RBP18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 ZNF662Q6ZS27 426 aa18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 PURBQ96QR8 312 aaKnown RBP18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 DUSP9Q99956 384 aaKnown RBP18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 MTA3Q9BTC8 594 aa18.27■□□□□ 0.51
EFEMP1-202ENST00000394555 KCPQ6ZWJ8 1503 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 PAFAH1B1P43034 410 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 APBA1Q02410 837 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 EVX2Q03828 476 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 HAUS3Q68CZ6 603 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 ANKRD40Q6AI12 368 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 TSGA10Q9BZW7 698 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 RBM12Q9NTZ6 932 aaKnown RBP18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 ZSCAN5CA6NGD5 496 aaPredicted RBP18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 BUB1O43683 1085 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 MAP2K2P36507 400 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 USP8P40818 1118 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 GUCY2FP51841 1108 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 DTHD1Q6ZMT9 781 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 JPH2Q9BR39 696 aaPredicted RBP18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 NFU1Q9UMS0 254 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 TRPM3Q9HCF6 1732 aaPredicted RBP18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 CNTNAP5Q8WYK1 1306 aa18.26■□□□□ 0.51
EFEMP1-202ENST00000394555 IBSPP21815 317 aaPredicted RBP18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 DYNLL1P63167 89 aaKnown RBP18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 SLC4A8Q2Y0W8 1093 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 B4GALNT4Q76KP1 1039 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 HPS3Q969F9 1004 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 C1orf167Q5SNV9 1468 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 MYH13Q9UKX3 1938 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 KLRC4O43908 158 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 STARD3NLO95772 234 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 EIF4A3P38919 411 aaKnown RBP18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 EMBQ6PCB8 327 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 RNPC3Q96LT9 517 aaKnown RBP18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 ARHGAP20Q9P2F6 1191 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 FER1L4A9Z1Z3 1794 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 MYH2Q9UKX2 1941 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 FAM153BP0C7A2 387 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 KIF11P52732 1056 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 RNASE9P60153 205 aaKnown RBP18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 PDE4DQ08499 809 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 FAM153CQ494X1 144 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 CFAP58Q5T655 872 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 ALS2CLQ60I27 953 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 ALS2CR12Q96Q35 445 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 MMRN2Q9H8L6 949 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 FAM153AQ9UHL3 310 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 HYOU1Q9Y4L1 999 aa18.25■□□□□ 0.51
EFEMP1-202ENST00000394555 EPHB6O15197 1021 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 CARSP49589 748 aaKnown RBP18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 RETREG2Q8NC44 543 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 GIMAP8Q8ND71 665 aaPredicted RBP18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 TMEM60Q9H2L4 133 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 FAM205AQ6ZU69 1335 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 FCER1AP12319 257 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 TRAPPC10P48553 1259 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 SEC24CP53992 1094 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 P2RX5Q93086 422 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 CXorf56Q9H5V9 222 aa18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
EFEMP1-202ENST00000394555 STK4Q13043 487 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 EPB41L5Q9HCM4 733 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 SALL4Q9UJQ4 1053 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 MEFVO15553 781 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms