RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
CDH16-202ENST00000394055 APOBEC3HQ6NTF7 200 aaKnown RBP16.54■□□□□ 0.24
CDH16-202ENST00000394055 TEKT1Q969V4 418 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 EEF2KMTQ96G04 330 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
CDH16-202ENST00000394055 FOCADQ5VW36 1801 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 KCNJ18B7U540 433 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 TTLL1O95922 423 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 ALDH1B1P30837 517 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 CASP14P31944 242 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 PRPHP41219 470 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 KCNJ12Q14500 433 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 ELF2Q15723 593 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 SUGT1Q9Y2Z0 365 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 KLRC4O43908 158 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 KCTD1Q719H9 257 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 KBTBD4Q9NVX7 518 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
CDH16-202ENST00000394055 TDP2O95551 362 aa16.52■□□□□ 0.24
CDH16-202ENST00000394055 PDE6BP35913 854 aa16.52■□□□□ 0.24
CDH16-202ENST00000394055 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDH16-202ENST00000394055 ADCY7P51828 1080 aa16.52■□□□□ 0.24
CDH16-202ENST00000394055 COPB1P53618 953 aaKnown RBP16.52■□□□□ 0.24
CDH16-202ENST00000394055 UBE2SQ16763 222 aa16.52■□□□□ 0.24
CDH16-202ENST00000394055 ERO1AQ96HE7 468 aa16.52■□□□□ 0.24
CDH16-202ENST00000394055 GYPCP04921 128 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 SMARCA1P28370 1054 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 CRKP46108 304 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 TNNI2P48788 182 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 RBM5P52756 815 aaKnown RBP eCLIP16.52■□□□□ 0.23
CDH16-202ENST00000394055 SYCP1Q15431 976 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 TCP11X2Q5H9J9 407 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 ADSSL1Q8N142 457 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 MASTLQ96GX5 879 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 L2HGDHQ9H9P8 463 aa16.52■□□□□ 0.23
CDH16-202ENST00000394055 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 PES1O00541 588 aaKnown RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 URI1O94763 535 aaPredicted RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 LIMA1Q9UHB6 759 aaKnown RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 MYH8P13535 1937 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 A0A0U1RQJ8 604 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 SLC37A4O43826 429 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 PPP1R11O60927 126 aaPredicted RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 MFAP3LO75121 409 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 SNHG28P0DPA3 235 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 GNG11P61952 73 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 RAD9BQ6WBX8 426 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 ATRIPQ8WXE1 791 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 MRPL44Q9H9J2 332 aaKnown RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 HPS3Q969F9 1004 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 AK8Q96MA6 479 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 PANX2Q96RD6 677 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 WDR24Q96S15 920 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 MMTAG2Q9BU76 263 aaKnown RBP16.51■□□□□ 0.23
CDH16-202ENST00000394055 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
CDH16-202ENST00000394055 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 ESYT2A0FGR8 921 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 ASIC1P78348 528 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 CALCRLQ16602 461 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 IRF2BP1Q8IU81 584 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 TRIM47Q96LD4 638 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 USP17L10C9JJH3 530 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 RNF225M0QZC1 329 aaPredicted RBP16.5■□□□□ 0.23
CDH16-202ENST00000394055 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
CDH16-202ENST00000394055 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 HHIPL2Q6UWX4 724 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 C2CD5Q86YS7 1000 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
CDH16-202ENST00000394055 DNAJC18Q9H819 358 aa16.5■□□□□ 0.23
CDH16-202ENST00000394055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH16-202ENST00000394055 EDIL3O43854 480 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 RHOBTB3O94955 611 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 UBXN1Q04323 297 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 SPAG1Q07617 926 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 PDE4DQ08499 809 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 KCNB1Q14721 858 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 ERCC6LQ2NKX8 1250 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 GJA10Q969M2 543 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
CDH16-202ENST00000394055 IRX2Q9BZI1 471 aaPredicted RBP16.49■□□□□ 0.23
CDH16-202ENST00000394055 TRIM9Q9C026 710 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 LZTFL1Q9NQ48 299 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 POTEMA6NI47 508 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 FCER1AP12319 257 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
CDH16-202ENST00000394055 GIMAP8Q8ND71 665 aaPredicted RBP16.49■□□□□ 0.23
CDH16-202ENST00000394055 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
CDH16-202ENST00000394055 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms