RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 MAN1B1Q9UKM7 699 aa25.15■■□□□ 1.62
HMGA2-203ENST00000393578 GJA3Q9Y6H8 435 aa25.15■■□□□ 1.62
HMGA2-203ENST00000393578 IKBKBO14920 756 aa25.14■■□□□ 1.62
HMGA2-203ENST00000393578 ACER1Q8TDN7 264 aa25.14■■□□□ 1.62
HMGA2-203ENST00000393578 AK8Q96MA6 479 aa25.14■■□□□ 1.62
HMGA2-203ENST00000393578 AMNQ9BXJ7 453 aa25.14■■□□□ 1.62
HMGA2-203ENST00000393578 RRAGDQ9NQL2 400 aaPredicted RBP25.14■■□□□ 1.62
HMGA2-203ENST00000393578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.14■■□□□ 1.61
HMGA2-203ENST00000393578 SH2D4AQ9H788 454 aa25.14■■□□□ 1.61
HMGA2-203ENST00000393578 ASNSP08243 561 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 MORC3Q14149 939 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 UBE2SQ16763 222 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 SPICE1Q8N0Z3 855 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 TEPSINQ96N21 525 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 BMP6P22004 513 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 PDXDC2PQ6P474 469 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 SAMD7Q7Z3H4 446 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 CCSER1Q9C0I3 900 aa25.13■■□□□ 1.61
HMGA2-203ENST00000393578 AFMP43652 599 aa25.12■■□□□ 1.61
HMGA2-203ENST00000393578 STAT2P52630 851 aa25.12■■□□□ 1.61
HMGA2-203ENST00000393578 TPM4P67936 248 aa25.12■■□□□ 1.61
HMGA2-203ENST00000393578 FBXO11Q86XK2 927 aa25.12■■□□□ 1.61
HMGA2-203ENST00000393578 MLKLQ8NB16 471 aa25.12■■□□□ 1.61
HMGA2-203ENST00000393578 ZKSCAN5Q9Y2L8 839 aa25.12■■□□□ 1.61
HMGA2-203ENST00000393578 GOLGA6L6A8MZA4 724 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 UBA7P41226 1012 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 NCAPHQ15003 741 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 PPP4R3AQ6IN85 833 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 VCPKMTQ9H867 229 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 DISC1Q9NRI5 854 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 DACH1Q9UI36 760 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 PHF20L1A8MW92 1017 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 EDIL3O43854 480 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 MSNP26038 577 aaKnown RBP25.11■■□□□ 1.61
HMGA2-203ENST00000393578 CDC25AP30304 524 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 DPYDQ12882 1025 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 TBC1D10BQ4KMP7 808 aaPredicted RBP25.11■■□□□ 1.61
HMGA2-203ENST00000393578 KIAA1755Q5JYT7 1200 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 GSDMAQ96QA5 445 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 PRR12Q9ULL5 1215 aa25.11■■□□□ 1.61
HMGA2-203ENST00000393578 CDC25BP30305 580 aa25.1■■□□□ 1.61
HMGA2-203ENST00000393578 MCTP2Q6DN12 878 aa25.1■■□□□ 1.61
HMGA2-203ENST00000393578 POTEDQ86YR6 584 aa25.1■■□□□ 1.61
HMGA2-203ENST00000393578 MRFAP1L1Q96HT8 127 aa25.1■■□□□ 1.61
HMGA2-203ENST00000393578 MTMR9Q96QG7 549 aa25.1■■□□□ 1.61
HMGA2-203ENST00000393578 ZNF541Q9H0D2 1346 aa25.1■■□□□ 1.61
HMGA2-203ENST00000393578 MYL5Q02045 173 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 KARSQ15046 597 aaKnown RBP25.09■■□□□ 1.61
HMGA2-203ENST00000393578 KIF4BQ2VIQ3 1234 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 SPON1Q9HCB6 807 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 HACL1Q9UJ83 578 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 SCAF8Q9UPN6 1271 aaKnown RBP25.09■■□□□ 1.61
HMGA2-203ENST00000393578 TPM3P06753 285 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 STAT6P42226 847 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 TRAF1Q13077 416 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 CALCRLQ16602 461 aa25.09■■□□□ 1.61
HMGA2-203ENST00000393578 NAP1L4Q99733 375 aaKnown RBP25.09■■□□□ 1.61
HMGA2-203ENST00000393578 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.09■■□□□ 1.61
HMGA2-203ENST00000393578 PP2D1A8MPX8 630 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 PLA2G6O60733 806 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 TDP2O95551 362 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 GCFC2P16383 781 aaKnown RBP25.08■■□□□ 1.61
HMGA2-203ENST00000393578 SNAP25P60880 206 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 FAM83BQ5T0W9 1011 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 IGSF22Q8N9C0 903 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 SPC24Q8NBT2 197 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 CHURC1Q8WUH1 139 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 RTN4Q9NQC3 1192 aaKnown RBP25.08■■□□□ 1.61
HMGA2-203ENST00000393578 GINM1Q9NU53 330 aa25.08■■□□□ 1.61
HMGA2-203ENST00000393578 USP17L15C9J2P7 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L13C9JLJ4 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L11C9JVI0 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L18D6R9N7 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L22D6RA61 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L17D6RBQ6 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L19D6RCP7 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L20D6RJB6 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 H7C1D1 291 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L24Q0WX57 530 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 AP3B2Q13367 1082 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 RRAGBQ5VZM2 374 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 USP17L6PQ6QN14 398 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 RASSF8Q8NHQ8 419 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 DEFB129Q9H1M3 183 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-203ENST00000393578 MEIS2O14770 477 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 GTPBP6O43824 516 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-203ENST00000393578 SLC37A4O43826 429 aa25.07■■□□□ 1.6
HMGA2-203ENST00000393578 CT47A1Q5JQC4 288 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-203ENST00000393578 ASTN2O75129 1339 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-203ENST00000393578 CLCN1P35523 988 aa25.06■■□□□ 1.6
HMGA2-203ENST00000393578 TECP42680 631 aa25.06■■□□□ 1.6
HMGA2-203ENST00000393578 FXR2P51116 673 aaKnown RBP eCLIP25.06■■□□□ 1.6
HMGA2-203ENST00000393578 TEX2Q8IWB9 1127 aa25.06■■□□□ 1.6
HMGA2-203ENST00000393578 DRC7Q8IY82 874 aa25.06■■□□□ 1.6
HMGA2-203ENST00000393578 MTRQ99707 1265 aa25.06■■□□□ 1.6
HMGA2-203ENST00000393578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.06■■□□□ 1.6
HMGA2-203ENST00000393578 USP11P51784 963 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 USH1GQ495M9 461 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 CABP7Q86V35 215 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms