RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 CYP39A1Q9NYL5 469 aa14.59□□□□□ -0.07
CTSC-202ENST00000393301 PNMA2Q9UL42 364 aa14.59□□□□□ -0.07
CTSC-202ENST00000393301 Q9Y3F1 56 aa14.59□□□□□ -0.07
CTSC-202ENST00000393301 SPTBN5Q9NRC6 3674 aaKnown RBP14.59□□□□□ -0.07
CTSC-202ENST00000393301 DCDC2CA8MYV0 355 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 NMT2O60551 498 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 ASGR1P07306 291 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 SNHG28P0DPA3 235 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 TTC14Q96N46 770 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 TRERF1Q96PN7 1200 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 MAF1Q9H063 256 aa14.58□□□□□ -0.08
CTSC-202ENST00000393301 SCN10AQ9Y5Y9 1956 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 A0A0U1RQG5 324 aaPredicted RBP14.57□□□□□ -0.08
CTSC-202ENST00000393301 ARVCFO00192 962 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 PQBP1O60828 265 aaKnown RBP14.57□□□□□ -0.08
CTSC-202ENST00000393301 CABYRO75952 493 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 TIMP1P01033 207 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
CTSC-202ENST00000393301 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
CTSC-202ENST00000393301 EPHB4P54760 987 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 IRX6P78412 446 aaPredicted RBP14.57□□□□□ -0.08
CTSC-202ENST00000393301 FPGSQ05932 587 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 ZNF697Q5TEC3 545 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 RASIP1Q5U651 963 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 KCTD1Q719H9 257 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 ZNF589Q86UQ0 364 aaPredicted RBP14.57□□□□□ -0.08
CTSC-202ENST00000393301 PLEKHM2Q8IWE5 1019 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 FAM126BQ8IXS8 530 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 FAM227BQ96M60 508 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 TMEM39AQ9NV64 488 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 CCDC171Q6TFL3 1326 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
CTSC-202ENST00000393301 CHD7Q9P2D1 2997 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 RANBP6O60518 1105 aaKnown RBP14.56□□□□□ -0.08
CTSC-202ENST00000393301 CD4P01730 458 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 C6orf222P0C671 652 aaPredicted RBP14.56□□□□□ -0.08
CTSC-202ENST00000393301 RAG1P15918 1043 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 MUM1L1Q5H9M0 696 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 TAPT1Q6NXT6 567 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 RASGRP2Q7LDG7 609 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 VTA1Q9NP79 307 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 PPP4R2Q9NY27 417 aa14.56□□□□□ -0.08
CTSC-202ENST00000393301 RBM47A0AV96 593 aaKnown RBP14.55□□□□□ -0.08
CTSC-202ENST00000393301 PDHBP11177 359 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 ALAS1P13196 640 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
CTSC-202ENST00000393301 TNFAIP2Q03169 654 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 NMIQ13287 307 aaPredicted RBP14.55□□□□□ -0.08
CTSC-202ENST00000393301 GNASQ5JWF2 1037 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 AKNAD1Q5T1N1 836 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 SYDE2Q5VT97 1194 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 IQSEC1Q6DN90 963 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 TTYH1Q9H313 450 aaPredicted RBP14.55□□□□□ -0.08
CTSC-202ENST00000393301 SEMA6BQ9H3T3 888 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 CCPG1Q9ULG6 757 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 MYO9BQ13459 2157 aa14.55□□□□□ -0.08
CTSC-202ENST00000393301 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.54□□□□□ -0.08
CTSC-202ENST00000393301 EDNRBP24530 442 aa14.54□□□□□ -0.08
CTSC-202ENST00000393301 MFAP1P55081 439 aaKnown RBP14.54□□□□□ -0.08
CTSC-202ENST00000393301 IKQ13123 557 aaPredicted RBP14.54□□□□□ -0.08
CTSC-202ENST00000393301 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
CTSC-202ENST00000393301 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
CTSC-202ENST00000393301 LNPKQ9C0E8 428 aa14.54□□□□□ -0.08
CTSC-202ENST00000393301 RNF41Q9H4P4 317 aaPredicted RBP14.54□□□□□ -0.08
CTSC-202ENST00000393301 NCOR1O75376 2440 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 SMPD1P17405 629 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.08
CTSC-202ENST00000393301 TTBK2Q6IQ55 1244 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 ANKS1AQ92625 1134 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 CDX2Q99626 313 aaPredicted RBP14.53□□□□□ -0.08
CTSC-202ENST00000393301 ADD3Q9UEY8 706 aaKnown RBP14.53□□□□□ -0.08
CTSC-202ENST00000393301 TRANK1O15050 2925 aa14.53□□□□□ -0.08
CTSC-202ENST00000393301 GRIN2DO15399 1336 aa14.52□□□□□ -0.08
CTSC-202ENST00000393301 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.52□□□□□ -0.09
CTSC-202ENST00000393301 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.52□□□□□ -0.09
CTSC-202ENST00000393301 DLL1O00548 723 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 TLR3O15455 904 aaKnown RBP14.52□□□□□ -0.09
CTSC-202ENST00000393301 SDSP20132 328 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 ALDH5A1P51649 535 aaPredicted RBP14.52□□□□□ -0.09
CTSC-202ENST00000393301 FSCN1Q16658 493 aaKnown RBP14.52□□□□□ -0.09
CTSC-202ENST00000393301 CCDC96Q2M329 555 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 DUSP28Q4G0W2 176 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 TMEM240Q5SV17 173 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 GPATCH4Q5T3I0 446 aaKnown RBP14.52□□□□□ -0.09
CTSC-202ENST00000393301 CCDC174Q6PII3 467 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 TBC1D10CQ8IV04 446 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 RGS22Q8NE09 1264 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 CCDC136Q96JN2 1154 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 MYH6P13533 1939 aa14.52□□□□□ -0.09
CTSC-202ENST00000393301 MUC3AQ02505 3323 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 NFIBO00712 420 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 ZEB2O60315 1214 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms