RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 AOC3Q16853 763 aa28.85■■■□□ 2.21
SMARCD3-203ENST00000392811 KCTD1Q719H9 257 aa28.85■■■□□ 2.21
SMARCD3-203ENST00000392811 SH3BP5LQ7L8J4 393 aa28.85■■■□□ 2.21
SMARCD3-203ENST00000392811 CUEDC2Q9H467 287 aa28.85■■■□□ 2.21
SMARCD3-203ENST00000392811 MAPK8IP1Q9UQF2 711 aa28.85■■■□□ 2.21
SMARCD3-203ENST00000392811 KCNB1Q14721 858 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 KMT5BQ4FZB7 885 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 PPP4R3BQ5MIZ7 849 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 C7orf43Q8WVR3 580 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 BAG1Q99933 345 aaPredicted RBP28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 PI4KBQ9UBF8 816 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 ARHGAP6O43182 974 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 CCP110O43303 1012 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 EDIL3O43854 480 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 PBX1P40424 430 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 SHROOM1Q2M3G4 852 aaPredicted RBP28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 KIF18AQ8NI77 898 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 RIC8AQ9NPQ8 531 aa28.84■■■□□ 2.21
SMARCD3-203ENST00000392811 USP17L10C9JJH3 530 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 FILIP1LQ4L180 1135 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 FCHSD1Q86WN1 690 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 IGSF22Q8N9C0 903 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 MTMR9Q96QG7 549 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 MAGEF1Q9HAY2 307 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 SERPINA10Q9UK55 444 aa28.83■■■□□ 2.21
SMARCD3-203ENST00000392811 ZSCAN29Q8IWY8 852 aaPredicted RBP28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 ADSSL1Q8N142 457 aa28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 MMTAG2Q9BU76 263 aaKnown RBP28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 LIMA1Q9UHB6 759 aaKnown RBP28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 TXKP42681 527 aa28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 SLC15A2Q16348 729 aa28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 CERKLQ49MI3 558 aaPredicted RBP28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 MTMR8Q96EF0 704 aa28.82■■■□□ 2.2
SMARCD3-203ENST00000392811 ZBTB5O15062 677 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 SLC37A4O43826 429 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 STX10O60499 249 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 TDP2O95551 362 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 EEF2P13639 858 aaKnown RBP28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 KRT31Q15323 416 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 CALCRLQ16602 461 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 UBE2SQ16763 222 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 PDCL3Q9H2J4 239 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 RHOBTB3O94955 611 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 MAP7D2Q96T17 732 aa28.81■■■□□ 2.2
SMARCD3-203ENST00000392811 NPM3O75607 178 aaKnown RBP28.8■■■□□ 2.2
SMARCD3-203ENST00000392811 TNNI2P48788 182 aa28.8■■■□□ 2.2
SMARCD3-203ENST00000392811 MKL1Q969V6 931 aa28.8■■■□□ 2.2
SMARCD3-203ENST00000392811 LRRC10BA6NIK2 292 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 AKR1B15C9JRZ8 316 aaPredicted RBP28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 CCT6AP40227 531 aaKnown RBP28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 CLK2P49760 499 aaKnown RBP28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 SPAG1Q07617 926 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 SEMA3FQ13275 785 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 REXO1L1PQ8IX06 675 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 TRIM34Q9BYJ4 488 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 KANSL2Q9H9L4 492 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 NYAP2Q9P242 653 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 TATDN1Q6P1N9 297 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 SYT10Q6XYQ8 523 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 GIMAP8Q8ND71 665 aaPredicted RBP28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 CUL5Q93034 780 aa28.79■■■□□ 2.2
SMARCD3-203ENST00000392811 RAD21O60216 631 aa28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 FXR2P51116 673 aaKnown RBP eCLIP28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 RBL2Q08999 1139 aa28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 EZH2Q15910 746 aaKnown RBP28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 TCP11X2Q5H9J9 407 aa28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 MTERF4Q7Z6M4 381 aaKnown RBP28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 TRIM9Q9C026 710 aa28.78■■■□□ 2.2
SMARCD3-203ENST00000392811 TRIM49BA6NDI0 452 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 KCNJ18B7U540 433 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 TUBB4AP04350 444 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 KCNJ12Q14500 433 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 PPFIBP1Q86W92 1011 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 CALML4Q96GE6 196 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 C7orf25Q9BPX7 421 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 TDRD3Q9H7E2 651 aaKnown RBP28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 PPP2R2CQ9Y2T4 447 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 H7C1D1 291 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 ZSCAN12O43309 604 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 MRPL12P52815 198 aaKnown RBP28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 COPB1P53618 953 aaKnown RBP28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 SEPT2Q15019 361 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 SLFN13Q68D06 897 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 SIAH1Q8IUQ4 282 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 DCAF4Q8WV16 495 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 PANX2Q96RD6 677 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 LRWD1Q9UFC0 647 aa28.77■■■□□ 2.2
SMARCD3-203ENST00000392811 N4BP3O15049 544 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 SLC1A4P43007 532 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 PMS1P54277 932 aaKnown RBP28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 VPS16Q9H269 839 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 PSTPIP2Q9H939 334 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 TAB2Q9NYJ8 693 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 STIM1Q13586 685 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 TMEM266Q2M3C6 531 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 ANKRD20A12PQ8NF67 263 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 STK32BQ9NY57 414 aa28.76■■■□□ 2.19
SMARCD3-203ENST00000392811 ITIH6Q6UXX5 1313 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 YDJCA8MPS7 323 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 ETF1P62495 437 aaKnown RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms